RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 CYP26B1Q9NR63 512 aa12.86□□□□□ -0.35
CTNNA1-205ENST00000517904 GABBR1Q9UBS5 961 aa12.86□□□□□ -0.35
CTNNA1-205ENST00000517904 CEP131Q9UPN4 1083 aa12.86□□□□□ -0.35
CTNNA1-205ENST00000517904 PCDHA10Q9Y5I2 948 aa12.86□□□□□ -0.35
CTNNA1-205ENST00000517904 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
CTNNA1-205ENST00000517904 C2orf16Q68DN1 1984 aa12.86□□□□□ -0.35
CTNNA1-205ENST00000517904 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
CTNNA1-205ENST00000517904 MAGEB2O15479 319 aa12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 ZNF862O60290 1169 aa12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 ZC3H11AO75152 810 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 CSDE1O75534 798 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 PSAPP07602 524 aa12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 CYP3A4P08684 503 aa12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 CTSAP10619 480 aa12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 ANGPT1Q15389 498 aa12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 SMAP1Q8IYB5 467 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 VN1R3Q9BXE9 311 aa12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 MRPL9Q9BYD2 267 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 TBC1D22BQ9NU19 505 aa12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 RBM28Q9NW13 759 aaKnown RBP12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 BRPF3Q9ULD4 1205 aa12.85□□□□□ -0.35
CTNNA1-205ENST00000517904 hCG_1984214I3L0E3 225 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 B4GALT3O60512 393 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 TMOD1P28289 359 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 DRP2Q13474 957 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 TDGQ13569 410 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 NECTIN1Q15223 517 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 LONRF3Q496Y0 759 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 CREB3L3Q68CJ9 461 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 GPR149Q86SP6 731 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 DDX53Q86TM3 631 aaKnown RBP12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 CABP7Q86V35 215 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 ZNF713Q8N859 430 aaPredicted RBP12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 LPPQ93052 612 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 IGSF21Q96ID5 467 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 DUSP12Q9UNI6 340 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 EPG5Q9HCE0 2579 aa12.84□□□□□ -0.35
CTNNA1-205ENST00000517904 OTOGLQ3ZCN5 2332 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 MEIS3P2A8K0S8 358 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 N4BP1O75113 896 aaKnown RBP12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 OATP04181 439 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 PHKA2P46019 1235 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 POLGP54098 1239 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 SETQ01105 290 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 PRKCEQ02156 737 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 BMS1Q14692 1282 aaKnown RBP12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 PTPN14Q15678 1187 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 UGCGQ16739 394 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 RTN1Q16799 776 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 CCDC149Q6ZUS6 474 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 SIX5Q8N196 739 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 DTWD2Q8NBA8 298 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 TMEM87AQ8NBN3 555 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 NLRP7Q8WX94 980 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 LENG9Q96B70 501 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 ACSF2Q96CM8 615 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 FAM167AQ96KS9 214 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 TCEANC2Q96MN5 208 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 SCLT1Q96NL6 688 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 GLT8D2Q9H1C3 349 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 NRDE2Q9H7Z3 1164 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 SFXN1Q9H9B4 322 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 KCNK12Q9HB15 430 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 FAM217BQ9NTX9 383 aaPredicted RBP12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 TBC1D13Q9NVG8 400 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 DACT1Q9NYF0 836 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 DNAJB4Q9UDY4 337 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 SAMM50Q9Y512 469 aa12.83□□□□□ -0.36
CTNNA1-205ENST00000517904 ZFHX4Q86UP3 3567 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 NARSO43776 548 aaKnown RBP12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 GALTP07902 379 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 CDC27P30260 824 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 SLC11A1P49279 550 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 CLCN4P51793 760 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 GIT2Q14161 759 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 PRR16Q569H4 304 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 OTOP3Q7RTS5 596 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 RTP3Q9BQQ7 232 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 TRAIPQ9BWF2 469 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 CHST12Q9NRB3 414 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 TCEAL9Q9UHQ7 104 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 FBXL21Q9UKT6 434 aa12.82□□□□□ -0.36
CTNNA1-205ENST00000517904 MED19A0JLT2 244 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 WDR64B1ANS9 1081 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 ZBTB43O43298 467 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 EXOSC10Q01780 885 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 TARBP2Q15633 366 aaKnown RBP12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 PFKFB3Q16875 520 aaPredicted RBP12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 LETM2Q2VYF4 491 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 NOMO2Q5JPE7 1267 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 PPFIBP1Q86W92 1011 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 ZNF280BQ86YH2 543 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 RSAD2Q8WXG1 361 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 RMDN1Q96DB5 314 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 KLHL5Q96PQ7 755 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
CTNNA1-205ENST00000517904 DISC1Q9NRI5 854 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms