RNA–Protein interactions for RNA: ENST00000517693.5

SPIDR-203, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 1,848 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-203ENST00000517693 ZNF792Q3KQV3 632 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 TOGARAM2Q6ZUX3 1019 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 ARMCX2Q7L311 632 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 REXO1L1PQ8IX06 675 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 XXYLT1Q8NBI6 393 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 EHBP1Q8NDI1 1231 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 TMEM161BQ8NDZ6 487 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 TCP11Q8WWU5 503 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 FGD4Q96M96 766 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 POLR3FQ9H1D9 316 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-203ENST00000517693 PORCNQ9H237 461 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 DHX33Q9H6R0 707 aaKnown RBP12.9□□□□□ -0.34
SPIDR-203ENST00000517693 PDLIM7Q9NR12 457 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 TBX20Q9UMR3 447 aa12.9□□□□□ -0.34
SPIDR-203ENST00000517693 EPN1Q9Y6I3 576 aaPredicted RBP12.9□□□□□ -0.34
SPIDR-203ENST00000517693 ZNF236Q9UL36 1845 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 GSTTP1A0A1W2PQM5 241 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 DENND3A2RUS2 1198 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 KIF5CO60282 957 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 NAMPTP43490 491 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 INHBEP58166 350 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 BFSP1Q12934 665 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 STRN3Q13033 797 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 LAMC2Q13753 1193 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 SPA17Q15506 151 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 BRDTQ58F21 947 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-203ENST00000517693 RAD9BQ6WBX8 426 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 PIAS4Q8N2W9 510 aaPredicted RBP12.89□□□□□ -0.35
SPIDR-203ENST00000517693 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 GLG1Q92896 1179 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 SLC35C1Q96A29 364 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 CCDC42Q96M95 316 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 SPATA33Q96N06 139 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 TSGA10Q9BZW7 698 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 DEF6Q9H4E7 631 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 SMARCAD1Q9H4L7 1026 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 POLD4Q9HCU8 107 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 AGPAT5Q9NUQ2 364 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 DOCK5Q9H7D0 1870 aa12.89□□□□□ -0.35
SPIDR-203ENST00000517693 SSU72P8A0A1W2PR75 194 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 TMEM150BA6NC51 233 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 TXNP10599 105 aaKnown RBP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 FSTL1Q12841 308 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 GRB14Q14449 540 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 LY6KQ17RY6 165 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 SFMBT2Q5VUG0 894 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 PDXDC1Q6P996 788 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 CCDC62Q6P9F0 684 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 ZNF662Q6ZS27 426 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 RRAGAQ7L523 313 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 EEPD1Q7L9B9 569 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 TRMT1LQ7Z2T5 733 aaKnown RBP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 PLEKHH3Q7Z736 793 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 DPP9Q86TI2 863 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 FBXO16Q8IX29 292 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 BORCS6Q96GS4 357 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 GPR20Q99678 358 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 KIAA1586Q9HCI6 787 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 GPRC5CQ9NQ84 441 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 BZW2Q9Y6E2 419 aaKnown RBP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 SLC15A5A6NIM6 579 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 RASSF10A6NK89 507 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 EIF3CLB5ME19 914 aaKnown RBP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 NKRFO15226 690 aaKnown RBP eCLIP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 GH1P01241 217 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 CCDC172P0C7W6 258 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 GARTP22102 1010 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 ANXA13P27216 316 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 CASP4P49662 377 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 KLK7P49862 253 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 KCNMA1Q12791 1236 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 MAMDC4Q6UXC1 1216 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 DEPTORQ8TB45 409 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 ATP8B4Q8TF62 1192 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 EMID1Q96A84 441 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 EIF3CQ99613 913 aaKnown RBP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 HAUS4Q9H6D7 363 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 NHEJ1Q9H9Q4 299 aaPredicted RBP12.88□□□□□ -0.35
SPIDR-203ENST00000517693 XPNPEP1Q9NQW7 623 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 HSPBP1Q9NZL4 362 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 GCNT4Q9P109 453 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 ARHGAP28Q9P2N2 729 aa12.88□□□□□ -0.35
SPIDR-203ENST00000517693 ZNFX1Q9P2E3 1918 aaKnown RBP12.87□□□□□ -0.35
SPIDR-203ENST00000517693 PLXNA1Q9UIW2 1896 aa12.87□□□□□ -0.35
SPIDR-203ENST00000517693 LRRC53A6NM62 1247 aa12.87□□□□□ -0.35
SPIDR-203ENST00000517693 KRT86O43790 486 aa12.87□□□□□ -0.35
SPIDR-203ENST00000517693 ZNF157P51786 506 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-203ENST00000517693 MXD4Q14582 209 aaPredicted RBP12.87□□□□□ -0.35
SPIDR-203ENST00000517693 TARBP2Q15633 366 aaKnown RBP12.87□□□□□ -0.35
SPIDR-203ENST00000517693 WDR59Q6PJI9 974 aa12.87□□□□□ -0.35
SPIDR-203ENST00000517693 RASAL3Q86YV0 1011 aa12.87□□□□□ -0.35
SPIDR-203ENST00000517693 BICD1Q96G01 975 aa12.87□□□□□ -0.35
SPIDR-203ENST00000517693 SPAG5Q96R06 1193 aa12.87□□□□□ -0.35
SPIDR-203ENST00000517693 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
SPIDR-203ENST00000517693 DESI2Q9BSY9 194 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms