RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 EPM2AIP1Q7L775 607 aaPredicted RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 USP17L1Q7RTZ2 530 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 PHLDB2Q86SQ0 1253 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 NLRX1Q86UT6 975 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 PNMA8AQ86V59 439 aaPredicted RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM160B2Q86V87 743 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZNF677Q86XU0 584 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 IRF2BP1Q8IU81 584 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MAPKAPK5Q8IW41 473 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRIM59Q8IWR1 403 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CDAN1Q8IWY9 1227 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 NELFCDQ8IXH7 590 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 PALM2Q8IXS6 379 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC13Q8IYE1 715 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 RCOR2Q8IZ40 523 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARHGAP18Q8N392 663 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 RIBC1Q8N443 379 aaPredicted RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 OGFOD1Q8N543 542 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCDC89Q8N998 374 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM133AQ8N9E0 248 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CNBD1Q8NA66 436 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 PRPF38AQ8NAV1 312 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TTC13Q8NBP0 860 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SLAIN1Q8ND83 568 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 FLAD1Q8NFF5 587 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CFAP61Q8NHU2 1237 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TPCN2Q8NHX9 752 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 PIP4K2CQ8TBX8 421 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MYCBPAPQ8TBZ2 947 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 GRAPLQ8TC17 118 aaPredicted RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SH3RF3Q8TEJ3 882 aaPredicted RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 RFFLQ8WZ73 363 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 DHX38Q92620 1227 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 STMN2Q93045 179 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MKL1Q969V6 931 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 COA7Q96BR5 231 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 ALKBH8Q96BT7 664 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 KLHL29Q96CT2 875 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 HVCN1Q96D96 273 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TBC1D31Q96DN5 1066 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 HOOK2Q96ED9 719 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SAAL1Q96ER3 474 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 BICD1Q96G01 975 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 PGM2Q96G03 612 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CEP95Q96GE4 821 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 ACSBG1Q96GR2 724 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SGSM3Q96HU1 749 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 NGLY1Q96IV0 654 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MS4A14Q96JA4 679 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 RNPC3Q96LT9 517 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 LRRC37BQ96QE4 947 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MTMR9Q96QG7 549 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 XPO6Q96QU8 1125 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 FNBP1Q96RU3 617 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CRAMP1Q96RY5 1269 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SMC6Q96SB8 1091 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 PSMB7Q99436 277 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 PAIP2Q9BPZ3 127 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMEM109Q9BVC6 243 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TEKT3Q9BXF9 490 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TLR10Q9BXR5 811 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 AP1M1Q9BXS5 423 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MAK16Q9BXY0 300 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 IMPG2Q9BZV3 1241 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 LACRTQ9GZZ8 138 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MAF1Q9H063 256 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 IQCGQ9H095 443 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TMEM60Q9H2L4 133 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 VCX3BQ9H321 246 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SEMA6BQ9H3T3 888 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CXorf56Q9H5V9 222 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM96AQ9H5X1 160 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 VCPKMTQ9H867 229 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SUGCTQ9HAC7 445 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MLXIPQ9HAP2 919 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 C17orf75Q9HAS0 396 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 PARVGQ9HBI0 331 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 CD209Q9NNX6 404 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 UBE2TQ9NPD8 197 aaPredicted RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 ST7Q9NRC1 585 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 IL17RBQ9NRM6 502 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 HOMER2Q9NSB8 354 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 RBM12Q9NTZ6 932 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TBC1D22BQ9NU19 505 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TXLNGQ9NUQ3 528 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 HAUS2Q9NVX0 235 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 MTMR4Q9NYA4 1195 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 NOP53Q9NZM5 478 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 WHRNQ9P202 907 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 NYAP2Q9P242 653 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 UVRAGQ9P2Y5 699 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SAP30BPQ9UHR5 308 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 DMGDHQ9UI17 866 aaKnown RBP2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 DNAJC12Q9UKB3 198 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 TRPC6Q9Y210 931 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 SIK3Q9Y2K2 1263 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARL2BPQ9Y2Y0 163 aa2.22□□□□□ -2.05
RNU1-40P-201ENST00000516816 USP15Q9Y4E8 981 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms