RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 KRT37O76014 449 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 ZNF888P0CJ79 500 aaPredicted RBP4.89□□□□□ -1.63
CAST-242ENST00000515063 ADCY8P40145 1251 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 SELENOPP49908 381 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 MECP2P51608 486 aaKnown RBP4.89□□□□□ -1.63
CAST-242ENST00000515063 KIF11P52732 1056 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 SESN2P58004 480 aaPredicted RBP4.89□□□□□ -1.63
CAST-242ENST00000515063 ROM1Q03395 351 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 NFYCQ13952 458 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 CATSPEREQ5SY80 951 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 LCE5AQ5TCM9 118 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 KANK2Q63ZY3 851 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 TMEM200BQ69YZ2 307 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 DNERQ8NFT8 737 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 APPBP2Q92624 585 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 NEIL1Q96FI4 390 aaPredicted RBP4.89□□□□□ -1.63
CAST-242ENST00000515063 CLUHP3Q96NS8 147 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 LRRC37BQ96QE4 947 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 AMNQ9BXJ7 453 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 OR10A2Q9H208 303 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 PUF60Q9UHX1 559 aaKnown RBP4.89□□□□□ -1.63
CAST-242ENST00000515063 ST6GALNAC2Q9UJ37 374 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 TMA7Q9Y2S6 64 aaKnown RBP4.89□□□□□ -1.63
CAST-242ENST00000515063 NR2E1Q9Y466 385 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 TNPO3Q9Y5L0 923 aaKnown RBP4.89□□□□□ -1.63
CAST-242ENST00000515063 ERCC6L2Q5T890 1561 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 MYBBP1AQ9BQG0 1328 aaKnown RBP4.89□□□□□ -1.63
CAST-242ENST00000515063 PTPRTO14522 1441 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 ZFYVE16Q7Z3T8 1539 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 INO80Q9ULG1 1556 aaPredicted RBP4.88□□□□□ -1.63
CAST-242ENST00000515063 PTPDC1A2A3K4 754 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 ARHGAP6O43182 974 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 ZNF623O75123 536 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 CLSTN1O94985 981 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 JMJD7P0C870 316 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 ZBTB48P10074 688 aaPredicted RBP4.88□□□□□ -1.63
CAST-242ENST00000515063 RRADP55042 308 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 CD83Q01151 205 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 ALDH6A1Q02252 535 aaKnown RBP4.88□□□□□ -1.63
CAST-242ENST00000515063 PABPC4Q13310 644 aaKnown RBP eCLIP4.88□□□□□ -1.63
CAST-242ENST00000515063 MOGSQ13724 837 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 ICAM4Q14773 271 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 CFAP100Q494V2 611 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 PIK3R6Q5UE93 754 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 AGBL4Q5VU57 503 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 LRSAM1Q6UWE0 723 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 C16orf86Q6ZW13 317 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 USP30Q70CQ3 517 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 ERCC4Q92889 916 aaPredicted RBP4.88□□□□□ -1.63
CAST-242ENST00000515063 LPPQ93052 612 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 KLC2Q9H0B6 622 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 B4GALT6Q9UBX8 382 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 OAZ3Q9UMX2 235 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 ZKSCAN5Q9Y2L8 839 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 VWA7Q9Y334 891 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 TSC22D4Q9Y3Q8 395 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 IQGAP1P46940 1657 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 RNF123Q5XPI4 1314 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 PARD3Q8TEW0 1356 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 SCAPERQ9BY12 1400 aa4.88□□□□□ -1.63
CAST-242ENST00000515063 CFAP74Q9C0B2 1584 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 MADDQ8WXG6 1647 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 ST20-MTHFSA0A0A6YYL1 179 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 RASSF10A6NK89 507 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 CBX4O00257 560 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 PPP1R12AO14974 1030 aaPredicted RBP4.87□□□□□ -1.63
CAST-242ENST00000515063 MUSKO15146 869 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 IGSF3O75054 1194 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 INSRRP14616 1297 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 CR2P20023 1033 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 RPS19P39019 145 aaKnown RBP4.87□□□□□ -1.63
CAST-242ENST00000515063 ADCY1Q08828 1119 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 ZNF460Q14592 562 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 CCDC184Q52MB2 194 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 TM4SF20Q53R12 229 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 TTC38Q5R3I4 469 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 CDCA2Q69YH5 1023 aaPredicted RBP4.87□□□□□ -1.63
CAST-242ENST00000515063 TRIM68Q6AZZ1 485 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 FSTL4Q6MZW2 842 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 KIF18BQ86Y91 864 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 KIAA1958Q8N8K9 716 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 PNISRQ8TF01 805 aaKnown RBP4.87□□□□□ -1.63
CAST-242ENST00000515063 CD248Q9HCU0 757 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 CDC42EP3Q9UKI2 254 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 NUDCQ9Y266 331 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 LMTK2Q8IWU2 1503 aa4.87□□□□□ -1.63
CAST-242ENST00000515063 UBA6A0AVT1 1052 aaPredicted RBP4.86□□□□□ -1.63
CAST-242ENST00000515063 CDC14BO60729 498 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 GAS7O60861 476 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 CDC45O75419 566 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 RAD17O75943 681 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 PRLP01236 227 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 MRE11P49959 708 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 KRTAP10-2P60368 255 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 PUM1Q14671 1186 aaKnown RBP eCLIP4.86□□□□□ -1.633e-7■□□□□ 11.1
CAST-242ENST00000515063 PCOLCEQ15113 449 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 EPHA7Q15375 998 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 RNF151Q2KHN1 245 aa4.86□□□□□ -1.63
CAST-242ENST00000515063 SLFN12LQ6IEE8 588 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms