RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 NLRC5Q86WI3 1866 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 RRN3P2A6NIE6 340 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 H3BQ06 376 aaPredicted RBP10.56□□□□□ -0.72
CDK7-210ENST00000513629 DDX39AO00148 427 aaKnown RBP10.56□□□□□ -0.72
CDK7-210ENST00000513629 ST8SIA5O15466 376 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 SPINT1O43278 529 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 CSPG5O95196 566 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 FOSP01100 380 aaPredicted RBP10.56□□□□□ -0.72
CDK7-210ENST00000513629 LINC00271P0C7V0 271 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 ARP10275 920 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 IL9P15248 144 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 CDC27P30260 824 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 CD52P31358 61 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 SREBF1P36956 1147 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 EXOSC10Q01780 885 aaKnown RBP10.56□□□□□ -0.72
CDK7-210ENST00000513629 AP3B2Q13367 1082 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 PLCB4Q15147 1175 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 CEP55Q53EZ4 464 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 TCEAL5Q5H9L2 206 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 EP400NLQ6ZTU2 488 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 CENPQQ7L2Z9 268 aaPredicted RBP10.56□□□□□ -0.72
CDK7-210ENST00000513629 TSEN2Q8NCE0 465 aaKnown RBP10.56□□□□□ -0.72
CDK7-210ENST00000513629 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.56□□□□□ -0.72
CDK7-210ENST00000513629 LINC01599Q8WXQ3 324 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 NSUN3Q9H649 340 aaKnown RBP10.56□□□□□ -0.72
CDK7-210ENST00000513629 AGO3Q9H9G7 860 aaKnown RBP10.56□□□□□ -0.72
CDK7-210ENST00000513629 BARHL2Q9NY43 387 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 TRPV2Q9Y5S1 764 aa10.56□□□□□ -0.72
CDK7-210ENST00000513629 RALGAPA2Q2PPJ7 1873 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 SMCO2A6NFE2 343 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 hCG_1984214I3L0E3 225 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 M0QZ92 97 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 MEN1O00255 615 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 ENPP3O14638 875 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 BACH1O14867 736 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 CDC45O75419 566 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 STAT5BP51692 787 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 BTG3Q14201 252 aaPredicted RBP10.55□□□□□ -0.72
CDK7-210ENST00000513629 KRT32Q14532 448 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 SWI5Q1ZZU3 235 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 C6orf118Q5T5N4 469 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 IER5Q5VY09 327 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 TRIM46Q7Z4K8 759 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 ZNF713Q8N859 430 aaPredicted RBP10.55□□□□□ -0.72
CDK7-210ENST00000513629 C11orf84Q9BUA3 381 aaPredicted RBP10.55□□□□□ -0.72
CDK7-210ENST00000513629 CD320Q9NPF0 282 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 AAASQ9NRG9 546 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 C5orf42Q9H799 3197 aa10.55□□□□□ -0.72
CDK7-210ENST00000513629 MYO7AQ13402 2215 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 FAM86C2PA6NEL3 165 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 C5orf67F2Z3F1 127 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 MEIS1O00470 390 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 GRM6O15303 877 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 CCNE2O96020 404 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 RPLP2P05387 115 aaKnown RBP10.54□□□□□ -0.72
CDK7-210ENST00000513629 BMP2P12643 396 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 CPA1P15085 419 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 IBSPP21815 317 aaPredicted RBP10.54□□□□□ -0.72
CDK7-210ENST00000513629 ZNF76P36508 570 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 BMPR1AP36894 532 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDK7-210ENST00000513629 RCAN1P53805 252 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 FGD1P98174 961 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 PAK2Q13177 524 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 PFKFB3Q16875 520 aaPredicted RBP10.54□□□□□ -0.72
CDK7-210ENST00000513629 JAKMIP3Q5VZ66 844 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 PLPPR4Q7Z2D5 763 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 TEX2Q8IWB9 1127 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 FAM178BQ8IXR5 827 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 NEK9Q8TD19 979 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 TNPO1Q92973 898 aaKnown RBP10.54□□□□□ -0.72
CDK7-210ENST00000513629 ZNF689Q96CS4 500 aaPredicted RBP10.54□□□□□ -0.72
CDK7-210ENST00000513629 PABPC5Q96DU9 382 aaKnown RBP10.54□□□□□ -0.72
CDK7-210ENST00000513629 UIMC1Q96RL1 719 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 INSM2Q96T92 566 aaPredicted RBP10.54□□□□□ -0.72
CDK7-210ENST00000513629 GLT8D2Q9H1C3 349 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 CLDND1Q9NY35 253 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 RWDD3Q9Y3V2 267 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 PCDHA2Q9Y5H9 948 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 IGSF9BQ9UPX0 1349 aa10.54□□□□□ -0.72
CDK7-210ENST00000513629 TTC3P53804 2025 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 ATG2AQ2TAZ0 1938 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 SMIM35A0A1B0GVV1 85 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 FAM86B1E9PN63 330 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 DGKIO75912 1065 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 RB1P06400 928 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 HMGB1P09429 215 aaKnown RBP10.53□□□□□ -0.72
CDK7-210ENST00000513629 FAM86B2P0C5J1 330 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 SCG2P13521 617 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 SLC26A2P50443 739 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 EPHA4P54764 986 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 KRT76Q01546 638 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 PDE4CQ08493 712 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 APOBRQ0VD83 1088 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 TMEM266Q2M3C6 531 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 PAN2Q504Q3 1202 aaKnown RBP10.53□□□□□ -0.72
CDK7-210ENST00000513629 TMEM31Q5JXX7 168 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 FAM160B1Q5W0V3 765 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 MTHFD1LQ6UB35 978 aa10.53□□□□□ -0.72
CDK7-210ENST00000513629 PLA2G4DQ86XP0 818 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms