RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 CABP5Q9NP86 173 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 TMEM260Q9NX78 707 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 KCMF1Q9P0J7 381 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 CD2APQ9Y5K6 639 aa3.46□□□□□ -1.86
PDGFC-208ENST00000512711 XDHP47989 1333 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 H7C1D1 291 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 TGM5O43548 720 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 RFPL3O75679 317 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 STC2O76061 302 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 TOX4O94842 621 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 PRPF6O94906 941 aaKnown RBP3.45□□□□□ -1.86
PDGFC-208ENST00000512711 CFBP00751 764 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 HHEXQ03014 270 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 EPHA7Q15375 998 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 ZNF174Q15697 407 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 UBE2R2Q712K3 238 aaPredicted RBP3.45□□□□□ -1.86
PDGFC-208ENST00000512711 ELOA2Q8IYF1 753 aaPredicted RBP3.45□□□□□ -1.86
PDGFC-208ENST00000512711 THEMISQ8N1K5 641 aaPredicted RBP3.45□□□□□ -1.86
PDGFC-208ENST00000512711 CHTF18Q8WVB6 975 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 NEU4Q8WWR8 484 aaPredicted RBP3.45□□□□□ -1.86
PDGFC-208ENST00000512711 GFM2Q969S9 779 aaKnown RBP3.45□□□□□ -1.86
PDGFC-208ENST00000512711 SLC7A6OSQ96CW6 309 aaPredicted RBP3.45□□□□□ -1.86
PDGFC-208ENST00000512711 WDR92Q96MX6 357 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 TRIM8Q9BZR9 551 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 HAPLN2Q9GZV7 340 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 MTG2Q9H4K7 406 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 ZMAT4Q9H898 229 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 TOMM22Q9NS69 142 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 GIT1Q9Y2X7 761 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 SPO11Q9Y5K1 396 aa3.45□□□□□ -1.86
PDGFC-208ENST00000512711 A0A0A6YYJ9 748 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 KPNA6O60684 536 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 F2P00734 622 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 KRT4P19013 534 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 RANGAP1P46060 587 aaPredicted RBP3.44□□□□□ -1.86
PDGFC-208ENST00000512711 SMAD3P84022 425 aaKnown RBP3.44□□□□□ -1.86
PDGFC-208ENST00000512711 CD69Q07108 199 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 ADCY2Q08462 1091 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 TUBA3CQ13748 450 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 C1QL3Q5VWW1 255 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 TUBA3EQ6PEY2 450 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 Q6ZPA2 131 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 BMP8AQ7Z5Y6 402 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 GSPT2Q8IYD1 628 aaKnown RBP3.44□□□□□ -1.86
PDGFC-208ENST00000512711 E2F7Q96AV8 911 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 PGBD4Q96DM1 585 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 CHFRQ96EP1 664 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 MPHOSPH9Q99550 1183 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 IL23AQ9NPF7 189 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 IFT57Q9NWB7 429 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 ING3Q9NXR8 418 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 GPRC5BQ9NZH0 403 aa3.44□□□□□ -1.86
PDGFC-208ENST00000512711 FAM20BO75063 409 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 PCDH8O95206 1070 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 KIR2DL3P43628 341 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 NEK4P51957 841 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 RABGGTBP53611 331 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 BCAR1P56945 870 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 SESN2P58004 480 aaPredicted RBP3.43□□□□□ -1.86
PDGFC-208ENST00000512711 TGFB2P61812 414 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 DSG1Q02413 1049 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 ABHD18Q0P651 414 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 TOB2Q14106 344 aaPredicted RBP3.43□□□□□ -1.86
PDGFC-208ENST00000512711 ELAVL1Q15717 326 aaKnown RBP3.43□□□□□ -1.86
PDGFC-208ENST00000512711 CNNM4Q6P4Q7 775 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 LRRTM3Q86VH5 581 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 DHX37Q8IY37 1157 aaKnown RBP3.43□□□□□ -1.86
PDGFC-208ENST00000512711 LPPQ93052 612 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 MIEF2Q96C03 454 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 CLIP3Q96DZ5 547 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 DRC1Q96MC2 740 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 CEP89Q96ST8 783 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 TCF25Q9BQ70 676 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 ORAI3Q9BRQ5 295 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 PITHD1Q9GZP4 211 aaPredicted RBP3.43□□□□□ -1.86
PDGFC-208ENST00000512711 MSL2Q9HCI7 577 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 POLR3BQ9NW08 1133 aaPredicted RBP3.43□□□□□ -1.86
PDGFC-208ENST00000512711 THG1LQ9NWX6 298 aaKnown RBP3.43□□□□□ -1.86
PDGFC-208ENST00000512711 NCDNQ9UBB6 729 aa3.43□□□□□ -1.86
PDGFC-208ENST00000512711 MAGEC2Q9UBF1 373 aaPredicted RBP3.43□□□□□ -1.86
PDGFC-208ENST00000512711 KLRG2A4D1S0 409 aaPredicted RBP3.42□□□□□ -1.86
PDGFC-208ENST00000512711 OPHN1O60890 802 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 RPS6KA4O75676 772 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 VSIG10L2P0DP72 767 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 GAAP10253 952 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 NR4A1P22736 598 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 MCM7P33993 719 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 FLT3P36888 993 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 DPTQ07507 201 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 CRHR2Q13324 411 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 SEPT7Q16181 437 aaKnown RBP3.42□□□□□ -1.86
PDGFC-208ENST00000512711 FAM214AQ32MH5 1076 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 FKBP15Q5T1M5 1219 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 KIAA1841Q6NSI8 718 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 NME9Q86XW9 330 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 LDLRAD3Q86YD5 345 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 PHYKPLQ8IUZ5 450 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 CMTM4Q8IZR5 234 aa3.42□□□□□ -1.86
PDGFC-208ENST00000512711 PIK3C3Q8NEB9 887 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms