RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 PADI6Q6TGC4 694 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 SLC30A10Q6XR72 485 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.04□□□□□ -0.8
CPNE4-210ENST00000512332 SRLQ86TD4 932 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 AGBL3Q8NEM8 1001 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 IFT81Q8WYA0 676 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 SEC14L1Q92503 715 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 ZBTB9Q96C00 473 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 CAPS2Q9BXY5 557 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 KCNH7Q9NS40 1196 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 ZNF536O15090 1300 aa10.04□□□□□ -0.8
CPNE4-210ENST00000512332 SART1O43290 800 aaKnown RBP10.03□□□□□ -0.8
CPNE4-210ENST00000512332 C21orf2O43822 256 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 FAM153BP0C7A2 387 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 DNA2P51530 1060 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 UBXN2AP68543 259 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 MYL7Q01449 175 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 CETN1Q12798 172 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 FAM153CQ494X1 144 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 ZNF772Q68DY9 489 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-210ENST00000512332 LRIG3Q6UXM1 1119 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 MAATS1Q7Z4T9 603 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 DAAM2Q86T65 1068 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 GLYCTKQ8IVS8 523 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 SYCP3Q8IZU3 236 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 PRPF38AQ8NAV1 312 aaKnown RBP10.03□□□□□ -0.8
CPNE4-210ENST00000512332 SLC17A8Q8NDX2 589 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 PIK3R5Q8WYR1 880 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 ZBED3Q96IU2 234 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-210ENST00000512332 IKZF4Q9H2S9 585 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 FAM153AQ9UHL3 310 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 AMFRQ9UKV5 643 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 PNMA2Q9UL42 364 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 UBIAD1Q9Y5Z9 338 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 ESYT3A0FGR9 886 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 ANKRD62A6NC57 917 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 ZSCAN5CA6NGD5 496 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-210ENST00000512332 KRT13P13646 458 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 PLS3P13797 630 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 CYP2J2P51589 502 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 TTMPQ5BVD1 217 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 PCNX4Q63HM2 1172 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 MIER3Q7Z3K6 550 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 KSR1Q8IVT5 923 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 KLHL7Q8IXQ5 586 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 CCDC26Q8TAB7 109 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 SLC35G2Q8TBE7 412 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 CLEC4DQ8WXI8 215 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 CTNNBL1Q8WYA6 563 aaPredicted RBP10.03□□□□□ -0.8
CPNE4-210ENST00000512332 LPAR1Q92633 364 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 LRRC45Q96CN5 670 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 CCDC43Q96MW1 224 aaKnown RBP10.03□□□□□ -0.8
CPNE4-210ENST00000512332 ACCSQ96QU6 501 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 IWS1Q96ST2 819 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 CARD9Q9H257 536 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 TBC1D22BQ9NU19 505 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 GINM1Q9NU53 330 aa10.03□□□□□ -0.8
CPNE4-210ENST00000512332 RRP15Q9Y3B9 282 aaKnown RBP10.03□□□□□ -0.8
CPNE4-210ENST00000512332 NOC2LQ9Y3T9 749 aaKnown RBP10.03□□□□□ -0.8
CPNE4-210ENST00000512332 ZNF233A6NK53 670 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 TMCO5BA8MYB1 307 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 MYO1CO00159 1063 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 KRIT1O00522 736 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 WDR46O15213 610 aaKnown RBP10.02□□□□□ -0.81
CPNE4-210ENST00000512332 EIF3HO15372 352 aaKnown RBP eCLIP10.02□□□□□ -0.81
CPNE4-210ENST00000512332 TNFAIP3P21580 790 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 ECHS1P30084 290 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 QARSP47897 775 aaKnown RBP10.02□□□□□ -0.81
CPNE4-210ENST00000512332 RARRES1P49788 294 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 RNASE9P60153 205 aaKnown RBP10.02□□□□□ -0.81
CPNE4-210ENST00000512332 ERVK-9P63128 1117 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 GTF2BQ00403 316 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 PHLDB3Q6NSJ2 640 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 TTLL6Q8N841 843 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 BANK1Q8NDB2 785 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 ARL8AQ96BM9 186 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 NAP1L3Q99457 506 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-210ENST00000512332 AGO4Q9HCK5 861 aaKnown RBP10.02□□□□□ -0.81
CPNE4-210ENST00000512332 FBXO28Q9NVF7 368 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 CCPG1Q9ULG6 757 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 ZHX2Q9Y6X8 837 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 BUB1BO60566 1050 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-210ENST00000512332 RAD17O75943 681 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 TRIM49P0CI25 452 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 TRIM49CP0CI26 452 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 VAMP7P51809 220 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 POU5F1Q01860 360 aaKnown RBP10.02□□□□□ -0.81
CPNE4-210ENST00000512332 PLS1Q14651 629 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 TKFCQ3LXA3 575 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 DNAJC21Q5F1R6 531 aaKnown RBP10.02□□□□□ -0.81
CPNE4-210ENST00000512332 KDM7AQ6ZMT4 941 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 RHOT2Q8IXI1 618 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 C4orf19Q8IY42 314 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 LARGE2Q8N3Y3 721 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 HOOK2Q96ED9 719 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 AGBL1Q96MI9 1066 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 TMEM39BQ9GZU3 492 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 GOLPH3Q9H4A6 298 aa10.02□□□□□ -0.81
CPNE4-210ENST00000512332 MYH11P35749 1972 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 PFASO15067 1338 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms