RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ZCCHC17Q9NP64 241 aaKnown RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 SCHIP1Q9P0W5 487 aaPredicted RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 ANKARQ7Z5J8 1434 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 UBN2Q6ZU65 1347 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 A0A1W2PQC6 194 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 CLDN3O15551 220 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 KITP10721 976 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 MARK3P27448 753 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 MTMR1Q13613 665 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 DRAP1Q14919 205 aaPredicted RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 TXNRD1Q16881 649 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 TEDDM1Q5T9Z0 273 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 ENAHQ8N8S7 591 aaPredicted RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 TRPV6Q9H1D0 765 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 TRPC5Q9UL62 973 aaPredicted RBP11.3□□□□□ -0.6
NEK1-206ENST00000510533 L3MBTL1Q9Y468 752 aa11.3□□□□□ -0.6
NEK1-206ENST00000510533 EFCAB6Q5THR3 1501 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
NEK1-206ENST00000510533 RGS9BPQ6ZS82 235 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 NCLNQ969V3 563 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 BTBD6Q96KE9 485 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 INTS2Q9H0H0 1204 aaKnown RBP11.29□□□□□ -0.6
NEK1-206ENST00000510533 OLA1Q9NTK5 396 aaKnown RBP11.29□□□□□ -0.6
NEK1-206ENST00000510533 DCTN4Q9UJW0 460 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 HEY1Q9Y5J3 304 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 NLRP1Q9C000 1473 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 CDC27P30260 824 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 SEMA3FQ13275 785 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 ZNF699Q32M78 642 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 KIAA1841Q6NSI8 718 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 COG1Q8WTW3 980 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 ECT2Q9H8V3 914 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 ABCF3Q9NUQ8 709 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 GTSE1Q9NYZ3 720 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 NEO1Q92859 1461 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 UBE4BO95155 1302 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 CFAP73A6NFT4 308 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 RAD17O75943 681 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 ATP1A1P05023 1023 aaKnown RBP11.29□□□□□ -0.6
NEK1-206ENST00000510533 VAMP7P51809 220 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 GUF1Q8N442 669 aaKnown RBP11.29□□□□□ -0.6
NEK1-206ENST00000510533 PPM1NQ8N819 430 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 SNF8Q96H20 258 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 WNT8AQ9H1J5 351 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 ALDH8A1Q9H2A2 487 aaPredicted RBP11.29□□□□□ -0.6
NEK1-206ENST00000510533 SLC13A4Q9UKG4 626 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 POTEB3A0JP26 581 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 POTECB2RU33 542 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 GH2P01242 217 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 FTLP02792 175 aaPredicted RBP11.29□□□□□ -0.6
NEK1-206ENST00000510533 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 PDHA1P08559 390 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 AP2B1P63010 937 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 OCA2Q04671 838 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 RC3H1Q5TC82 1133 aaKnown RBP11.29□□□□□ -0.6
NEK1-206ENST00000510533 POTEBQ6S5H4 581 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 CLEC17AQ6ZS10 378 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 PARP9Q8IXQ6 854 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 ETNK1Q9HBU6 452 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 DONSONQ9NYP3 566 aa11.29□□□□□ -0.6
NEK1-206ENST00000510533 GRM4Q14833 912 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 MORF4L2Q15014 288 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 HABP4Q5JVS0 413 aaKnown RBP11.28□□□□□ -0.6
NEK1-206ENST00000510533 TRIM59Q8IWR1 403 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 PIGBQ92521 554 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 FAM213AQ9BRX8 229 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 ZNF341Q9BYN7 854 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 IP6K2Q9UHH9 426 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 SAMD9Q5K651 1589 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L15C9J2P7 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L13C9JLJ4 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L11C9JVI0 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L18D6R9N7 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L22D6RA61 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L17D6RBQ6 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L19D6RCP7 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L20D6RJB6 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 H3BRJ5 948 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 SLC16A4O15374 487 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 E2F6O75461 281 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 GGPS1O95749 300 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 TBXAS1P24557 533 aaPredicted RBP11.28□□□□□ -0.6
NEK1-206ENST00000510533 CIITAP33076 1130 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 TNFAIP2Q03169 654 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 ACTN3Q08043 901 aaPredicted RBP11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L24Q0WX57 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 CCDC137Q6PK04 289 aaKnown RBP11.28□□□□□ -0.6
NEK1-206ENST00000510533 USP17L6PQ6QN14 398 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 TBC1D22BQ9NU19 505 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 CCDC195A0A1B0GUA6 201 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 KRT14P02533 472 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 MYBL1P10243 752 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 SMARCA1P28370 1054 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 PDIA2Q13087 525 aaKnown RBP11.28□□□□□ -0.6
NEK1-206ENST00000510533 GPS1Q13098 491 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 DRP2Q13474 957 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 SLC27A3Q5K4L6 730 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 SHC4Q6S5L8 630 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms