RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 SOGA3Q5TF21 947 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 DUPD1Q68J44 220 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 UNC13DQ70J99 1090 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 MAGEB18Q96M61 343 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 LRRC37BQ96QE4 947 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 TRIM31Q9BZY9 425 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 USP40Q9NVE5 1235 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 TBCCD1Q9NVR7 557 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 SUCLA2Q9P2R7 463 aaPredicted RBP10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 STX18Q9P2W9 335 aaKnown RBP10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 CHKBQ9Y259 395 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 NUB1Q9Y5A7 615 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 UMODL1Q5DID0 1318 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 RPTORQ8N122 1335 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 SMIM31A0A1B0GVY4 71 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 TRIM43BA6NCK2 446 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 A6NJR5 290 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 HNRNPCL1O60812 293 aaKnown RBP10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 DCTN3O75935 186 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 ASMTLO95671 621 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 T-ENOLP0DO92 83 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 SMARCA1P28370 1054 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 ADCY1Q08828 1119 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 ITGA9Q13797 1035 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 CFAP157Q5JU67 520 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 SYDE2Q5VT97 1194 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 CCDC174Q6PII3 467 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 VSTM1Q6UX27 236 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 BRINP3Q76B58 766 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 RIBC1Q8N443 379 aaPredicted RBP10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 EEF2KMTQ96G04 330 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 ROPN1BQ9BZX4 212 aaPredicted RBP10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 EPB41L1Q9H4G0 881 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 ROPN1Q9HAT0 212 aaPredicted RBP10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 UTP6Q9NYH9 597 aaKnown RBP10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 NDUFA13Q9P0J0 144 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 PITPNM2Q9BZ72 1349 aa10.78□□□□□ -0.68
PDGFRA-207ENST00000509092 TMEM247A6NEH6 219 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 KRT36O76013 467 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 PSMG1O95456 288 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 TROVE2P10155 538 aaKnown RBP eCLIP10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 SLCO1A2P46721 670 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 FKBP4Q02790 459 aaKnown RBP eCLIP10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 MAN2A1Q16706 1144 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 CERKLQ49MI3 558 aaPredicted RBP10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 ZCWPW2Q504Y3 356 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 ATG9AQ7Z3C6 839 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 KBTBD2Q8IY47 623 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 DIS3LQ8TF46 1054 aaKnown RBP10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 SNRNP27Q8WVK2 155 aaKnown RBP10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 DDX17Q92841 729 aaKnown RBP10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 ABHD8Q96I13 439 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 ARPC5LQ9BPX5 153 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 ERP44Q9BS26 406 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 PHF20Q9BVI0 1012 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 KRT82Q9NSB4 513 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 DBR1Q9UK59 544 aaKnown RBP10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 PKD1L3Q7Z443 1732 aa10.77□□□□□ -0.68
PDGFRA-207ENST00000509092 ABCB11O95342 1321 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 POTEFA5A3E0 1075 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 FAM187AA6NFU0 413 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 RGL2O15211 777 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 WDR46O15213 610 aaKnown RBP10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 NKRFO15226 690 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 TBX10O75333 385 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 POTEIP0CG38 1075 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 ATP5DP30049 168 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 RGS2P41220 211 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 PPP2R5EQ16537 467 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 RFWD3Q6PCD5 774 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 FAM47EQ6ZV65 393 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 DAAM2Q86T65 1068 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 TMEM110Q86TL2 294 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 PDCD7Q8N8D1 485 aaKnown RBP10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 LRRC57Q8N9N7 239 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 ERMNQ8TAM6 284 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 SETDB2Q96T68 719 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 MYD88Q99836 296 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 METTL22Q9BUU2 404 aaPredicted RBP10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 SLIT3O75094 1523 aa10.77□□□□□ -0.69
PDGFRA-207ENST00000509092 LONP1P36776 959 aaKnown RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 DRG2P55039 364 aaKnown RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 MTTPP55157 894 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 TCIRG1Q13488 830 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 CYLC2Q14093 348 aaPredicted RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 IL17AQ16552 155 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 INF2Q27J81 1249 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 ZNF449Q6P9G9 518 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 ZDHHC24Q6UX98 284 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 BARGINQ6ZT62 677 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 ANKRD42Q8N9B4 389 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 GDAP1Q8TB36 358 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 RBM46Q8TBY0 533 aaKnown RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 ARHGEF2Q92974 986 aaKnown RBP10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 TEKT1Q969V4 418 aa10.76□□□□□ -0.69
PDGFRA-207ENST00000509092 SHISA4Q96DD7 197 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms