RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TMTC3Q6ZXV5 915 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 OTOP3Q7RTS5 596 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 DCLK2Q8N568 766 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 ST13P5Q8NFI4 369 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-209ENST00000498725 SLC22A17Q8WUG5 538 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 BCL7CQ8WUZ0 217 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-209ENST00000498725 NLRP7Q8WX94 980 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 BBXQ8WY36 941 aaPredicted RBP10.34□□□□□ -0.75
CCDC171-209ENST00000498725 ADAMTS10Q9H324 1103 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 RIC8AQ9NPQ8 531 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 GABBR1Q9UBS5 961 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 DUSP12Q9UNI6 340 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 USTQ9Y2C2 406 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 DMDP11532 3685 aa10.34□□□□□ -0.75
CCDC171-209ENST00000498725 MIA3Q5JRA6 1907 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 DMXL1Q9Y485 3027 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 SMCO2A6NFE2 343 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 IPO5O00410 1097 aaKnown RBP10.33□□□□□ -0.76
CCDC171-209ENST00000498725 C2CD2LO14523 706 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 DHX15O43143 795 aaKnown RBP10.33□□□□□ -0.76
CCDC171-209ENST00000498725 DCNP07585 359 aaKnown RBP10.33□□□□□ -0.76
CCDC171-209ENST00000498725 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 EIF4BP23588 611 aaKnown RBP10.33□□□□□ -0.76
CCDC171-209ENST00000498725 TMOD1P28289 359 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 MCM5P33992 734 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 GPR149Q86SP6 731 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 FANCBQ8NB91 859 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 IGSF21Q96ID5 467 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 ZNF577Q9BSK1 485 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 MRPL9Q9BYD2 267 aaKnown RBP10.33□□□□□ -0.76
CCDC171-209ENST00000498725 NRDE2Q9H7Z3 1164 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 SFXN1Q9H9B4 322 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 DNAJB4Q9UDY4 337 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 CNTNAP5Q8WYK1 1306 aa10.33□□□□□ -0.76
CCDC171-209ENST00000498725 WDR87Q6ZQQ6 2873 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 RIF1Q5UIP0 2472 aaKnown RBP10.32□□□□□ -0.76
CCDC171-209ENST00000498725 A0A0U1RQF3 1178 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 KRBA1A5PL33 1030 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 MEIS3P2A8K0S8 358 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 FOSP01100 380 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-209ENST00000498725 PSAPP07602 524 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 CTSAP10619 480 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 DARSP14868 501 aaKnown RBP10.32□□□□□ -0.76
CCDC171-209ENST00000498725 SREBF1P36956 1147 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 GPC3P51654 580 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 TWF2Q6IBS0 349 aaKnown RBP10.32□□□□□ -0.76
CCDC171-209ENST00000498725 DDX53Q86TM3 631 aaKnown RBP10.32□□□□□ -0.76
CCDC171-209ENST00000498725 ZNF598Q86UK7 904 aaKnown RBP10.32□□□□□ -0.76
CCDC171-209ENST00000498725 TMTC2Q8N394 836 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 TMEM87BQ96K49 555 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 TBC1D17Q9HA65 648 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 MAFBQ9Y5Q3 323 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-209ENST00000498725 V9GY48 417 aaPredicted RBP10.32□□□□□ -0.76
CCDC171-209ENST00000498725 FANCMQ8IYD8 2048 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 MYH15Q9Y2K3 1946 aa10.32□□□□□ -0.76
CCDC171-209ENST00000498725 COL4A3Q01955 1670 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 IGLV3-22A0A075B6J6 115 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 ADAMTS3O15072 1205 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 MAGEB2O15479 319 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 SGSM2O43147 1006 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 CHMP2AO43633 222 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 N4BP1O75113 896 aaKnown RBP10.31□□□□□ -0.76
CCDC171-209ENST00000498725 GALTP07902 379 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 SLC11A1P49279 550 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 CLCN4P51793 760 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 POLGP54098 1239 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-209ENST00000498725 PTPN14Q15678 1187 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 LETM2Q2VYF4 491 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 NOMO2Q5JPE7 1267 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 SYNE3Q6ZMZ3 975 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 FAM43BQ6ZT52 329 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-209ENST00000498725 NIPA1Q7RTP0 329 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 ZNF280BQ86YH2 543 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 MAP4K1Q92918 833 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 CNTNAP3BQ96NU0 1288 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 KLHL5Q96PQ7 755 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 SH2D3AQ9BRG2 576 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 VN1R3Q9BXE9 311 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 EMILIN2Q9BXX0 1053 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 CNTNAP3Q9BZ76 1288 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 MAN1C1Q9NR34 630 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 TBC1D13Q9NVG8 400 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 DACT1Q9NYF0 836 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 NAP1L2Q9ULW6 460 aaPredicted RBP10.31□□□□□ -0.76
CCDC171-209ENST00000498725 CEP131Q9UPN4 1083 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 PIN4Q9Y237 131 aaKnown RBP10.31□□□□□ -0.76
CCDC171-209ENST00000498725 PCDHA10Q9Y5I2 948 aa10.31□□□□□ -0.76
CCDC171-209ENST00000498725 TDRD15B5MCY1 1934 aaKnown RBP10.31□□□□□ -0.76
CCDC171-209ENST00000498725 MTCL1Q9Y4B5 1905 aaKnown RBP10.31□□□□□ -0.76
CCDC171-209ENST00000498725 CCDC195A0A1B0GUA6 201 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 TMEM150BA6NC51 233 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 ZNF862O60290 1169 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 B4GALT3O60512 393 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 OATP04181 439 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 CNPP09543 421 aaKnown RBP10.3□□□□□ -0.76
CCDC171-209ENST00000498725 SPATA31D3P0C874 917 aa10.3□□□□□ -0.76
CCDC171-209ENST00000498725 LIFRP42702 1097 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms