RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 COG6Q9Y2V7 657 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 RAD50Q92878 1312 aa6.18□□□□□ -1.42
FXN-205ENST00000498653 MYH8P13535 1937 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 USP17L12C9JPN9 530 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 USP17L21D6R901 530 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 WNT7AO00755 349 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 CFBP00751 764 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 HLA-DOAP06340 250 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 GNAI3P08754 354 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 CTSHP09668 335 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 RASGRF1Q13972 1273 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 GAS6Q14393 721 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 WTAPQ15007 396 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 UAP1L1Q3KQV9 507 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 HEATR6Q6AI08 1181 aaKnown RBP6.17□□□□□ -1.42
FXN-205ENST00000498653 TPRG1Q6ZUI0 275 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 FAM174AQ8TBP5 190 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 MRPS27Q92552 414 aaKnown RBP6.17□□□□□ -1.42
FXN-205ENST00000498653 IER2Q9BTL4 223 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 NGRNQ9NPE2 291 aaKnown RBP6.17□□□□□ -1.42
FXN-205ENST00000498653 A1CFQ9NQ94 594 aaKnown RBP6.17□□□□□ -1.42
FXN-205ENST00000498653 C9orf78Q9NZ63 289 aaPredicted RBP6.17□□□□□ -1.42
FXN-205ENST00000498653 HDAC5Q9UQL6 1122 aa6.17□□□□□ -1.42
FXN-205ENST00000498653 PDS5AQ29RF7 1337 aaKnown RBP6.17□□□□□ -1.42
FXN-205ENST00000498653 MAGEB6P1A0A0J9YX57 407 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 ENPP3O14638 875 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 NCAM2O15394 837 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 PAPSS2O95340 614 aaPredicted RBP6.16□□□□□ -1.42
FXN-205ENST00000498653 C8AP07357 584 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 MCCD1P59942 119 aaPredicted RBP6.16□□□□□ -1.42
FXN-205ENST00000498653 AAMPQ13685 434 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 BRDTQ58F21 947 aaPredicted RBP6.16□□□□□ -1.42
FXN-205ENST00000498653 WDR5BQ86VZ2 330 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 THNSL1Q8IYQ7 743 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 COLGALT1Q8NBJ5 622 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 EXOC6Q8TAG9 804 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 SLC22A17Q8WUG5 538 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 LPIN2Q92539 896 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 EMID1Q96A84 441 aaPredicted RBP6.16□□□□□ -1.42
FXN-205ENST00000498653 EHD4Q9H223 541 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 SFXN1Q9H9B4 322 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 CABP5Q9NP86 173 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 DDX41Q9UJV9 622 aaKnown RBP6.16□□□□□ -1.42
FXN-205ENST00000498653 TMX2Q9Y320 296 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 PCDHB12Q9Y5F1 795 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 CLUHO75153 1309 aa6.16□□□□□ -1.42
FXN-205ENST00000498653 HAS3O00219 553 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 GRM8O00222 908 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 C8BP07358 591 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 UBTFL1P0CB47 393 aaPredicted RBP6.15□□□□□ -1.42
FXN-205ENST00000498653 RDXP35241 583 aaKnown RBP6.15□□□□□ -1.42
FXN-205ENST00000498653 EIF2S3P41091 472 aaKnown RBP6.15□□□□□ -1.42
FXN-205ENST00000498653 CXCL12P48061 93 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 SKOR1P84550 965 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 PLCB3Q01970 1234 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 NR1H3Q13133 447 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 SEMA3BQ13214 749 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 ERICH6BQ5W0A0 696 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 CACNA2D4Q7Z3S7 1137 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 MMP21Q8N119 569 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 C7orf31Q8N865 590 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 MRPL43Q8N983 215 aaKnown RBP6.15□□□□□ -1.42
FXN-205ENST00000498653 CHST13Q8NET6 341 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 GAB3Q8WWW8 586 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 FGF14Q92915 247 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 KAZALD1Q96I82 304 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 NELL2Q99435 816 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 MEIS3Q99687 375 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 USP44Q9H0E7 712 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 WDR6Q9NNW5 1121 aaKnown RBP6.15□□□□□ -1.42
FXN-205ENST00000498653 C2orf42Q9NWW7 574 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 FBXO40Q9UH90 709 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 SERPINB13Q9UIV8 391 aa6.15□□□□□ -1.42
FXN-205ENST00000498653 SVILO95425 2214 aa6.15□□□□□ -1.43
FXN-205ENST00000498653 UPK3BL1B0FP48 263 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 UPK3BL2E5RIL1 263 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 NKRFO15226 690 aaKnown RBP eCLIP6.14□□□□□ -1.43
FXN-205ENST00000498653 TLX3O43711 291 aaPredicted RBP6.14□□□□□ -1.43
FXN-205ENST00000498653 F2P00734 622 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 AFPP02771 609 aaKnown RBP6.14□□□□□ -1.43
FXN-205ENST00000498653 GNAI2P04899 355 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 LAMP2P13473 410 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 SMC1AQ14683 1233 aaKnown RBP6.14□□□□□ -1.43
FXN-205ENST00000498653 PPP2R5BQ15173 497 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 FAM83BQ5T0W9 1011 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 C15orf39Q6ZRI6 1047 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 CABP7Q86V35 215 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 ZC3H18Q86VM9 953 aaKnown RBP6.14□□□□□ -1.43
FXN-205ENST00000498653 MARCH9Q86YJ5 346 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 NPAS4Q8IUM7 802 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 CYP4X1Q8N118 509 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 CPXCR1Q8N123 301 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 PNPLA1Q8N8W4 532 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 KLHDC4Q8TBB5 520 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 TTC9Q92623 222 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 FOXJ1Q92949 421 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 MED8Q96G25 268 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 ZC3H10Q96K80 434 aaKnown RBP6.14□□□□□ -1.43
FXN-205ENST00000498653 ALG1Q9BT22 464 aa6.14□□□□□ -1.43
FXN-205ENST00000498653 USP26Q9BXU7 913 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms