RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 CCDC60Q8IWA6 550 aaPredicted RBP6.78□□□□□ -1.32
HMGCL-206ENST00000496907 RPUSD2Q8IZ73 545 aaKnown RBP6.78□□□□□ -1.32
HMGCL-206ENST00000496907 TMEM199Q8N511 208 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 PRSS33Q8NF86 280 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 RASSF8Q8NHQ8 419 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 SLC7A3Q8WY07 619 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 LENG1Q96BZ8 264 aaPredicted RBP6.78□□□□□ -1.32
HMGCL-206ENST00000496907 SPATA32Q96LK8 384 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 USP28Q96RU2 1077 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 INO80BQ9C086 356 aaPredicted RBP6.78□□□□□ -1.32
HMGCL-206ENST00000496907 MTIF3Q9H2K0 278 aaKnown RBP6.78□□□□□ -1.32
HMGCL-206ENST00000496907 CUEDC2Q9H467 287 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 RNPEPQ9H4A4 650 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 TFIP11Q9UBB9 837 aaKnown RBP6.78□□□□□ -1.32
HMGCL-206ENST00000496907 HDAC6Q9UBN7 1215 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 STK17AQ9UEE5 414 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 USP25Q9UHP3 1055 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 CLIC4Q9Y696 253 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 TRIOO75962 3097 aa6.78□□□□□ -1.32
HMGCL-206ENST00000496907 IGSF9BQ9UPX0 1349 aa6.77□□□□□ -1.32
HMGCL-206ENST00000496907 MAP1BP46821 2468 aaKnown RBP6.77□□□□□ -1.32
HMGCL-206ENST00000496907 MBLAC1A4D2B0 266 aaPredicted RBP6.77□□□□□ -1.33
HMGCL-206ENST00000496907 EML1O00423 815 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 EYA4O95677 639 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 CD4P01730 458 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 ZNF286BP0CG31 522 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 KLRC1P26715 233 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 HOXC8P31273 242 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 ID4P47928 161 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 ME1P48163 572 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 POU5F1BQ06416 359 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 RBL2Q08999 1139 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 NCBP1Q09161 790 aaKnown RBP6.77□□□□□ -1.33
HMGCL-206ENST00000496907 TBC1D8BQ0IIM8 1120 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 MXD4Q14582 209 aaPredicted RBP6.77□□□□□ -1.33
HMGCL-206ENST00000496907 XKR9Q5GH70 373 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 KANK3Q6NY19 840 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 C16orf59Q7L2K0 433 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 CABP7Q86V35 215 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 SERINC5Q86VE9 423 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 CATSPER3Q86XQ3 398 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 FAM126BQ8IXS8 530 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 IQUBQ8NA54 791 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 MCPH1Q8NEM0 835 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 SNX29Q8TEQ0 813 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 HERVK_113Q902F9 699 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 DYDC2Q96IM9 177 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 CEP170P1Q96L14 293 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 GBP4Q96PP9 640 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 MAP7D2Q96T17 732 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 PCYT2Q99447 389 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 LXNQ9BS40 222 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 BCAS3Q9H6U6 928 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 C17orf75Q9HAS0 396 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 MAGEF1Q9HAY2 307 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 CYP26B1Q9NR63 512 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 HOOK1Q9UJC3 728 aaKnown RBP6.77□□□□□ -1.33
HMGCL-206ENST00000496907 TUBE1Q9UJT0 475 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 TBX21Q9UL17 535 aa6.77□□□□□ -1.33
HMGCL-206ENST00000496907 YBX2Q9Y2T7 364 aaKnown RBP6.77□□□□□ -1.33
HMGCL-206ENST00000496907 A0A1W2PQ27 194 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 A0A1W2PQ64 194 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 A0A1W2PQD8 194 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 ARHGEF35A5YM69 484 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 H0YCG3 227 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 SORBS3O60504 671 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 EFCAB14O75071 495 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 MAFO75444 373 aaPredicted RBP6.76□□□□□ -1.33
HMGCL-206ENST00000496907 MYL1P05976 194 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 SPATA31C1P0DKV0 1188 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 CMA1P23946 247 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 MARK3P27448 753 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 MARCKSP29966 332 aaPredicted RBP6.76□□□□□ -1.33
HMGCL-206ENST00000496907 SSTR3P32745 418 aaPredicted RBP6.76□□□□□ -1.33
HMGCL-206ENST00000496907 RABGGTBP53611 331 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 POLGP54098 1239 aaPredicted RBP6.76□□□□□ -1.33
HMGCL-206ENST00000496907 CHMP4BP1P59074 171 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 PSMC6P62333 389 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 ADAM17P78536 824 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 PRKCEQ02156 737 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 CEBPZQ03701 1054 aaKnown RBP6.76□□□□□ -1.33
HMGCL-206ENST00000496907 DNM1Q05193 864 aaKnown RBP6.76□□□□□ -1.33
HMGCL-206ENST00000496907 TFDP1Q14186 410 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 ACAP1Q15027 740 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 PPP2R5AQ15172 486 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 TARBP2Q15633 366 aaKnown RBP6.76□□□□□ -1.33
HMGCL-206ENST00000496907 RASIP1Q5U651 963 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 RRAGBQ5VZM2 374 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 EFCAB12Q6NXP0 572 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 MTHFD1LQ6UB35 978 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 CLEC17AQ6ZS10 378 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 HFE2Q6ZVN8 426 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 OTOP2Q7RTS6 562 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 SYT2Q8N9I0 419 aaPredicted RBP6.76□□□□□ -1.33
HMGCL-206ENST00000496907 BANK1Q8NDB2 785 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 KIFAP3Q92845 792 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 GTPBP4Q9BZE4 634 aaKnown RBP6.76□□□□□ -1.33
HMGCL-206ENST00000496907 KCNH6Q9H252 994 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 SETD4Q9NVD3 440 aa6.76□□□□□ -1.33
HMGCL-206ENST00000496907 RGL1Q9NZL6 768 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms