RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 MUTP22033 750 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 RPA1P27694 616 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 TOB1P50616 345 aaPredicted RBP19■□□□□ 0.63
COMMD3-214ENST00000496071 FXR2P51116 673 aaKnown RBP eCLIP19■□□□□ 0.63
COMMD3-214ENST00000496071 PDIA5Q14554 519 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 MXD4Q14582 209 aaPredicted RBP19■□□□□ 0.63
COMMD3-214ENST00000496071 RILPL1Q5EBL4 403 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 SRGAP1Q7Z6B7 1085 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 CATSPER3Q86XQ3 398 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 KSR1Q8IVT5 923 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 C4orf32Q8N8J7 132 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 P2RX5Q93086 422 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 NACC1Q96RE7 527 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 RAB34Q9BZG1 259 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 LMAN2LQ9H0V9 348 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 IFT122Q9HBG6 1241 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 PRDM6Q9NQX0 595 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 COG5Q9UP83 839 aa19■□□□□ 0.63
COMMD3-214ENST00000496071 MRPL42Q9Y6G3 142 aaKnown RBP19■□□□□ 0.63
COMMD3-214ENST00000496071 A0A0U1RQF3 1178 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 CSDE1O75534 798 aaKnown RBP18.99■□□□□ 0.63
COMMD3-214ENST00000496071 SKIP12755 728 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 FGFR4P22455 802 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 RARRES1P49788 294 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 MRPS5P82675 430 aaKnown RBP18.99■□□□□ 0.63
COMMD3-214ENST00000496071 LAMTOR4Q0VGL1 99 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 PTGDRQ13258 359 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 PAN2Q504Q3 1202 aaKnown RBP18.99■□□□□ 0.63
COMMD3-214ENST00000496071 LARP1BQ659C4 914 aaKnown RBP18.99■□□□□ 0.63
COMMD3-214ENST00000496071 HAUS3Q68CZ6 603 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 CATSPER4Q7RTX7 472 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 FERMT3Q86UX7 667 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 ECHDC2Q86YB7 292 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 PIGOQ8TEQ8 1089 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 SYMPKQ92797 1274 aaKnown RBP18.99■□□□□ 0.63
COMMD3-214ENST00000496071 TRAIPQ9BWF2 469 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 AAASQ9NRG9 546 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 DBR1Q9UK59 544 aaKnown RBP18.99■□□□□ 0.63
COMMD3-214ENST00000496071 PCDHB6Q9Y5E3 794 aa18.99■□□□□ 0.63
COMMD3-214ENST00000496071 TBKBP1A7MCY6 615 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 DLL1O00548 723 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 MED24O75448 989 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 SRGAP2CP0DJJ0 459 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 PRPHP41219 470 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 GATMP50440 423 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 POU5F1BQ06416 359 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 CUL4AQ13619 759 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 TFDP1Q14186 410 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 NBR1Q14596 966 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 AAK1Q2M2I8 961 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 TIGD5Q53EQ6 642 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 TJAP1Q5JTD0 557 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 FAM102BQ5T8I3 360 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 TMEM117Q9H0C3 514 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 XPNPEP1Q9NQW7 623 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.98■□□□□ 0.63
COMMD3-214ENST00000496071 BMP2KQ9NSY1 1161 aaPredicted RBP18.98■□□□□ 0.63
COMMD3-214ENST00000496071 LRWD1Q9UFC0 647 aa18.98■□□□□ 0.63
COMMD3-214ENST00000496071 KIAA1671Q9BY89 1806 aa18.97■□□□□ 0.63
COMMD3-214ENST00000496071 PHKA2P46019 1235 aa18.97■□□□□ 0.63
COMMD3-214ENST00000496071 PCBP1Q15365 356 aaKnown RBP eCLIP18.97■□□□□ 0.63
COMMD3-214ENST00000496071 SPOUT1Q5T280 376 aaKnown RBP18.97■□□□□ 0.63
COMMD3-214ENST00000496071 ABI1Q8IZP0 508 aa18.97■□□□□ 0.63
COMMD3-214ENST00000496071 RNF149Q8NC42 400 aa18.97■□□□□ 0.63
COMMD3-214ENST00000496071 RSPH1Q8WYR4 309 aa18.97■□□□□ 0.63
COMMD3-214ENST00000496071 ASB2Q96Q27 587 aa18.97■□□□□ 0.63
COMMD3-214ENST00000496071 PIN4Q9Y237 131 aaKnown RBP18.97■□□□□ 0.63
COMMD3-214ENST00000496071 PCDHB12Q9Y5F1 795 aa18.97■□□□□ 0.63
COMMD3-214ENST00000496071 EYSQ5T1H1 3165 aa18.97■□□□□ 0.63
COMMD3-214ENST00000496071 FGFR1P11362 822 aa18.96■□□□□ 0.63
COMMD3-214ENST00000496071 ARL2P36404 184 aa18.96■□□□□ 0.63
COMMD3-214ENST00000496071 RAB27AP51159 221 aa18.96■□□□□ 0.63
COMMD3-214ENST00000496071 CSPP1Q1MSJ5 1256 aa18.96■□□□□ 0.63
COMMD3-214ENST00000496071 TWF2Q6IBS0 349 aaKnown RBP18.96■□□□□ 0.63
COMMD3-214ENST00000496071 POTEHQ6S545 545 aa18.96■□□□□ 0.63
COMMD3-214ENST00000496071 IGSF22Q8N9C0 903 aa18.96■□□□□ 0.63
COMMD3-214ENST00000496071 MCPH1Q8NEM0 835 aa18.96■□□□□ 0.63
COMMD3-214ENST00000496071 HLA-CQ95604 372 aa18.96■□□□□ 0.63
COMMD3-214ENST00000496071 GTF3C3Q9Y5Q9 886 aa18.96■□□□□ 0.63
COMMD3-214ENST00000496071 CCT6AP40227 531 aaKnown RBP18.95■□□□□ 0.62
COMMD3-214ENST00000496071 PTENP60484 403 aa18.95■□□□□ 0.62
COMMD3-214ENST00000496071 NCBP1Q09161 790 aaKnown RBP18.95■□□□□ 0.62
COMMD3-214ENST00000496071 DTHD1Q6ZMT9 781 aa18.95■□□□□ 0.62
COMMD3-214ENST00000496071 ZNF598Q86UK7 904 aaKnown RBP18.95■□□□□ 0.62
COMMD3-214ENST00000496071 IFNLR1Q8IU57 520 aaPredicted RBP18.95■□□□□ 0.62
COMMD3-214ENST00000496071 CASD1Q96PB1 797 aa18.95■□□□□ 0.62
COMMD3-214ENST00000496071 AGPAT5Q9NUQ2 364 aa18.95■□□□□ 0.62
COMMD3-214ENST00000496071 TYW1Q9NV66 732 aaKnown RBP18.95■□□□□ 0.62
COMMD3-214ENST00000496071 PLAGL2Q9UPG8 496 aa18.95■□□□□ 0.62
COMMD3-214ENST00000496071 A0A087WWV3 80 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 GRM6O15303 877 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 USO1O60763 962 aaKnown RBP18.94■□□□□ 0.62
COMMD3-214ENST00000496071 ZNF623O75123 536 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 LAG3P18627 525 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 PDCP20941 246 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 POTEGQ6S5H5 508 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 KLHL23Q8NBE8 558 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 RNF169Q8NCN4 708 aa18.94■□□□□ 0.62
COMMD3-214ENST00000496071 COL25A1Q9BXS0 654 aaPredicted RBP18.94■□□□□ 0.62
COMMD3-214ENST00000496071 NFKBIZQ9BYH8 718 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms