RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 TXKP42681 527 aa27.07■■□□□ 1.92
HLA-C-209ENST00000495835 GATMP50440 423 aa27.07■■□□□ 1.92
HLA-C-209ENST00000495835 TPH2Q8IWU9 490 aa27.07■■□□□ 1.92
HLA-C-209ENST00000495835 PSPC1Q8WXF1 523 aaKnown RBP27.07■■□□□ 1.92
HLA-C-209ENST00000495835 PPP2R3CQ969Q6 453 aa27.07■■□□□ 1.92
HLA-C-209ENST00000495835 ZNF668Q96K58 619 aaPredicted RBP27.07■■□□□ 1.92
HLA-C-209ENST00000495835 UPF2Q9HAU5 1272 aaKnown RBP27.07■■□□□ 1.92
HLA-C-209ENST00000495835 ALG13Q9NP73 1137 aaKnown RBP27.07■■□□□ 1.92
HLA-C-209ENST00000495835 ANKEF1Q9NU02 776 aa27.07■■□□□ 1.92
HLA-C-209ENST00000495835 COL4A3BPQ9Y5P4 624 aa27.07■■□□□ 1.92
HLA-C-209ENST00000495835 ST18O60284 1047 aa27.06■■□□□ 1.92
HLA-C-209ENST00000495835 FOSBP53539 338 aa27.06■■□□□ 1.92
HLA-C-209ENST00000495835 CTTNQ14247 550 aaKnown RBP27.06■■□□□ 1.92
HLA-C-209ENST00000495835 XKR9Q5GH70 373 aa27.06■■□□□ 1.92
HLA-C-209ENST00000495835 SRGAP1Q7Z6B7 1085 aa27.06■■□□□ 1.92
HLA-C-209ENST00000495835 TYW1Q9NV66 732 aaKnown RBP27.06■■□□□ 1.92
HLA-C-209ENST00000495835 ATG2AQ2TAZ0 1938 aa27.06■■□□□ 1.92
HLA-C-209ENST00000495835 ARID2Q68CP9 1835 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 LAG3P18627 525 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 IBSPP21815 317 aaPredicted RBP27.05■■□□□ 1.92
HLA-C-209ENST00000495835 TRAPPC10P48553 1259 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 CYP4A11Q02928 519 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 CAMK1Q14012 370 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 SPOUT1Q5T280 376 aaKnown RBP27.05■■□□□ 1.92
HLA-C-209ENST00000495835 ZNF598Q86UK7 904 aaKnown RBP27.05■■□□□ 1.92
HLA-C-209ENST00000495835 ABI1Q8IZP0 508 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 ZNF579Q8NAF0 562 aaKnown RBP27.05■■□□□ 1.92
HLA-C-209ENST00000495835 PRPF31Q8WWY3 499 aaKnown RBP27.05■■□□□ 1.92
HLA-C-209ENST00000495835 CASD1Q96PB1 797 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 CWH43Q9H720 699 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 IFT122Q9HBG6 1241 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 MYO7AQ13402 2215 aa27.05■■□□□ 1.92
HLA-C-209ENST00000495835 FGFR1P11362 822 aa27.04■■□□□ 1.92
HLA-C-209ENST00000495835 KCNA5P22460 613 aa27.04■■□□□ 1.92
HLA-C-209ENST00000495835 GUCY1B3Q02153 619 aa27.04■■□□□ 1.92
HLA-C-209ENST00000495835 PCBP1Q15365 356 aaKnown RBP eCLIP27.04■■□□□ 1.921e-6■■□□□ 14.3
HLA-C-209ENST00000495835 CTC1Q2NKJ3 1217 aa27.04■■□□□ 1.92
HLA-C-209ENST00000495835 NLRP4Q96MN2 994 aa27.04■■□□□ 1.92
HLA-C-209ENST00000495835 KIF3AQ9Y496 699 aa27.04■■□□□ 1.92
HLA-C-209ENST00000495835 CARNS1A5YM72 827 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 WNT7AO00755 349 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 FGFR4P22455 802 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 MCM7P33993 719 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 RAB27AP51159 221 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 POU5F1BQ06416 359 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 MXD4Q14582 209 aaPredicted RBP27.03■■□□□ 1.92
HLA-C-209ENST00000495835 EMC2Q15006 297 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 PDE12Q6L8Q7 609 aaKnown RBP27.03■■□□□ 1.92
HLA-C-209ENST00000495835 NOSTRINQ8IVI9 506 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 LRRC43Q8N309 656 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 POF1BQ8WVV4 589 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 MTRQ99707 1265 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 RNF19AQ9NV58 838 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 LZTS1Q9Y250 596 aa27.03■■□□□ 1.92
HLA-C-209ENST00000495835 ZNF623O75123 536 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 CSDE1O75534 798 aaKnown RBP27.02■■□□□ 1.92
HLA-C-209ENST00000495835 DGAT1O75907 488 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 PHKA2P46019 1235 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 LAMTOR4Q0VGL1 99 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 GNL2Q13823 731 aaKnown RBP27.02■■□□□ 1.92
HLA-C-209ENST00000495835 CATSPER4Q7RTX7 472 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 KSR1Q8IVT5 923 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 COLGALT1Q8NBJ5 622 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.02■■□□□ 1.92
HLA-C-209ENST00000495835 MRPL9Q9BYD2 267 aaKnown RBP27.02■■□□□ 1.92
HLA-C-209ENST00000495835 TMEM60Q9H2L4 133 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 TUFT1Q9NNX1 390 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 FAM50BQ9Y247 325 aa27.02■■□□□ 1.92
HLA-C-209ENST00000495835 ZBTB39O15060 712 aa27.01■■□□□ 1.91
HLA-C-209ENST00000495835 DNAJB1P25685 340 aa27.01■■□□□ 1.91
HLA-C-209ENST00000495835 U2AF2P26368 475 aaKnown RBP eCLIP27.01■■□□□ 1.91
HLA-C-209ENST00000495835 PLCB3Q01970 1234 aa27.01■■□□□ 1.91
HLA-C-209ENST00000495835 HYAL1Q12794 435 aa27.01■■□□□ 1.91
HLA-C-209ENST00000495835 FERMT3Q86UX7 667 aa27.01■■□□□ 1.91
HLA-C-209ENST00000495835 TMEM143Q96AN5 459 aa27.01■■□□□ 1.91
HLA-C-209ENST00000495835 NOL7Q9UMY1 257 aaKnown RBP27.01■■□□□ 1.91
HLA-C-209ENST00000495835 PIN4Q9Y237 131 aaKnown RBP27.01■■□□□ 1.91
HLA-C-209ENST00000495835 PLXNA4Q9HCM2 1894 aa27.01■■□□□ 1.91
HLA-C-209ENST00000495835 FSD2A1L4K1 749 aa27■■□□□ 1.91
HLA-C-209ENST00000495835 FGF18O76093 207 aa27■■□□□ 1.91
HLA-C-209ENST00000495835 ATP2B1P20020 1258 aa27■■□□□ 1.91
HLA-C-209ENST00000495835 PPM1AP35813 382 aa27■■□□□ 1.91
HLA-C-209ENST00000495835 TWF2Q6IBS0 349 aaKnown RBP27■■□□□ 1.91
HLA-C-209ENST00000495835 AGPAT5Q9NUQ2 364 aa27■■□□□ 1.91
HLA-C-209ENST00000495835 CLDND1Q9NY35 253 aa27■■□□□ 1.91
HLA-C-209ENST00000495835 GRXCR2A6NFK2 248 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 OR52Z1P0C646 297 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 SRGAP2CP0DJJ0 459 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 ATF7P17544 494 aaPredicted RBP26.99■■□□□ 1.91
HLA-C-209ENST00000495835 MUTP22033 750 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 MCM2P49736 904 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 CLLU1OSQ5K130 101 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 LRRC55Q6ZSA7 311 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 THNSL1Q8IYQ7 743 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 CCDC43Q96MW1 224 aaKnown RBP26.99■■□□□ 1.91
HLA-C-209ENST00000495835 POLR3CQ9BUI4 534 aaPredicted RBP26.99■■□□□ 1.91
HLA-C-209ENST00000495835 XPNPEP1Q9NQW7 623 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 FAM105AQ9NUU6 356 aa26.99■■□□□ 1.91
HLA-C-209ENST00000495835 PUF60Q9UHX1 559 aaKnown RBP26.99■■□□□ 1.91
HLA-C-209ENST00000495835 RARRES1P49788 294 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms