RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 EIF4HQ15056 248 aaKnown RBP7.71□□□□□ -1.18
CCDC39-207ENST00000495817 ZMAT1Q5H9K5 638 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 NXNQ6DKJ4 435 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 LRSAM1Q6UWE0 723 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 OTOP2Q7RTS6 562 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 AMOTL1Q8IY63 956 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 ZNF496Q96IT1 587 aaPredicted RBP7.71□□□□□ -1.18
CCDC39-207ENST00000495817 BDH2Q9BUT1 245 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 MS4A5Q9H3V2 200 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 KCNG1Q9UIX4 513 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 ZDHHC9Q9Y397 364 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 MRFAP1Q9Y605 127 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 SLC4A7Q9Y6M7 1214 aa7.71□□□□□ -1.18
CCDC39-207ENST00000495817 A0A0G2JNJ9 132 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 UBA6A0AVT1 1052 aaPredicted RBP7.7□□□□□ -1.18
CCDC39-207ENST00000495817 ZSCAN20P17040 1043 aaPredicted RBP7.7□□□□□ -1.18
CCDC39-207ENST00000495817 MOGSQ13724 837 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 PDCD1Q15116 288 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 PCBP2Q15366 365 aaKnown RBP eCLIP7.7□□□□□ -1.18
CCDC39-207ENST00000495817 ZNF827Q17R98 1081 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 TBC1D10BQ4KMP7 808 aaPredicted RBP7.7□□□□□ -1.18
CCDC39-207ENST00000495817 TTC38Q5R3I4 469 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 FAM102BQ5T8I3 360 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 GRAMD4Q6IC98 578 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 ARHGEF18Q6ZSZ5 1173 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 PHYKPLQ8IUZ5 450 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 WDR75Q8IWA0 830 aaKnown RBP7.7□□□□□ -1.18
CCDC39-207ENST00000495817 CMIPQ8IY22 773 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 TCEAL8Q8IYN2 117 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 MYO1HQ8N1T3 1032 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 RTF1Q92541 710 aaKnown RBP7.7□□□□□ -1.18
CCDC39-207ENST00000495817 ERCC4Q92889 916 aaPredicted RBP7.7□□□□□ -1.18
CCDC39-207ENST00000495817 RHOBTB2Q9BYZ6 727 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 MKS1Q9NXB0 559 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 Q9UFV3 132 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 MSRAQ9UJ68 235 aa7.7□□□□□ -1.18
CCDC39-207ENST00000495817 LUC7L2Q9Y383 392 aaKnown RBP7.7□□□□□ -1.18
CCDC39-207ENST00000495817 U2AF1L5P0DN76 240 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-207ENST00000495817 PPP2CBP62714 309 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 PPP2CAP67775 309 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 U2AF1Q01081 240 aaKnown RBP eCLIP7.69□□□□□ -1.18
CCDC39-207ENST00000495817 CD83Q01151 205 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 ESPNLQ6ZVH7 1005 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 PNMA8AQ86V59 439 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-207ENST00000495817 C7orf31Q8N865 590 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 JPH3Q8WXH2 748 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-207ENST00000495817 SSH1Q8WYL5 1049 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 MAML3Q96JK9 1138 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 WNT8AQ9H1J5 351 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 SEC61A2Q9H9S3 476 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 MSL2Q9HCI7 577 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 ANKRD6Q9Y2G4 727 aa7.69□□□□□ -1.18
CCDC39-207ENST00000495817 PRC1O43663 620 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 ITGB3P05106 788 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 ENPP1P22413 925 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 ADCY8P40145 1251 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 TBX4P57082 545 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 SLC6A3Q01959 620 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 FSCN1Q16658 493 aaKnown RBP7.68□□□□□ -1.18
CCDC39-207ENST00000495817 SLFN13Q68D06 897 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 SLFN12LQ6IEE8 588 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 CXorf57Q6NSI4 855 aaKnown RBP7.68□□□□□ -1.18
CCDC39-207ENST00000495817 CXorf67Q86X51 503 aaPredicted RBP7.68□□□□□ -1.18
CCDC39-207ENST00000495817 CPA6Q8N4T0 437 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 IP6K2Q9UHH9 426 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 GIT1Q9Y2X7 761 aa7.68□□□□□ -1.18
CCDC39-207ENST00000495817 LCHNA4D1U4 455 aa7.67□□□□□ -1.18
CCDC39-207ENST00000495817 KLHL33A6NCF5 533 aa7.67□□□□□ -1.18
CCDC39-207ENST00000495817 MAFGO15525 162 aa7.67□□□□□ -1.18
CCDC39-207ENST00000495817 VCAM1P19320 739 aa7.67□□□□□ -1.18
CCDC39-207ENST00000495817 KCNQ1P51787 676 aa7.67□□□□□ -1.18
CCDC39-207ENST00000495817 TRIM68Q6AZZ1 485 aa7.67□□□□□ -1.18
CCDC39-207ENST00000495817 TIGD7Q6NT04 549 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-207ENST00000495817 GPR155Q7Z3F1 870 aa7.67□□□□□ -1.18
CCDC39-207ENST00000495817 CCM2LQ9NUG4 571 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-207ENST00000495817 PNMA8BQ9ULN7 279 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-207ENST00000495817 ZNF536O15090 1300 aa7.67□□□□□ -1.18
CCDC39-207ENST00000495817 GOLGA6CA6NDK9 693 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 GOLGA6BA6NDN3 693 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 K7ESM1 405 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 PCDHGA12O60330 932 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 B4GALT4O60513 344 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 H2AFYO75367 372 aaKnown RBP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 CNOT4O95628 575 aaKnown RBP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 CT47B1P0C2W7 299 aaPredicted RBP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 GOLGA6DP0CG33 693 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 ZNF888P0CJ79 500 aaPredicted RBP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 MEOX1P50221 254 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 MANFP55145 182 aaKnown RBP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 BCAR1P56945 870 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 PLP2Q04941 152 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 HLTFQ14527 1009 aaKnown RBP eCLIP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 GLB1LQ6UWU2 654 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 CMTR2Q8IYT2 770 aaKnown RBP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 TTC9BQ8N6N2 239 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 MAGEB6Q8N7X4 407 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 RPGRQ92834 1020 aaKnown RBP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 TUBGCP5Q96RT8 1024 aa7.66□□□□□ -1.18
CCDC39-207ENST00000495817 RBM15Q96T37 977 aaKnown RBP eCLIP7.66□□□□□ -1.18
CCDC39-207ENST00000495817 NUP88Q99567 741 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms