RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 CDHR1Q96JP9 859 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 ASCC2Q9H1I8 757 aaPredicted RBP4.34□□□□□ -1.72
ATG3-207ENST00000494571 SIAEQ9HAT2 523 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 XAB2Q9HCS7 855 aaKnown RBP4.34□□□□□ -1.72
ATG3-207ENST00000494571 LRWD1Q9UFC0 647 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 TUBE1Q9UJT0 475 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 EXOC7Q9UPT5 735 aa4.34□□□□□ -1.72
ATG3-207ENST00000494571 COL16A1Q07092 1604 aaPredicted RBP4.34□□□□□ -1.72
ATG3-207ENST00000494571 CLTCQ00610 1675 aaKnown RBP4.34□□□□□ -1.72
ATG3-207ENST00000494571 SALL3Q9BXA9 1300 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ANKRD34BA5PLL1 514 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ZSCAN5BA6NJL1 495 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 TBKBP1A7MCY6 615 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 TTC34A8MYJ7 566 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 MATN2O00339 956 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 TBC1D12O60347 775 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ACSL4O60488 711 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 MTRF1O75570 445 aaKnown RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 WFS1O76024 890 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 CBX6O95503 412 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 KRT75O95678 551 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 AFPP02771 609 aaKnown RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 ALDH2P05091 517 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 CHRNB1P11230 501 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ZNF18P17022 549 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 CES1P23141 567 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ETFBP38117 255 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 PRCPP42785 496 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 AFMP43652 599 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 UBXN1Q04323 297 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 EIF2B5Q13144 721 aaKnown RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 NECTIN1Q15223 517 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 UAP1Q16222 522 aaPredicted RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 WDR72Q3MJ13 1102 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 DCAF8Q5TAQ9 597 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 DEPDC1Q5TB30 811 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 B3GNT6Q6ZMB0 384 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 RNF19BQ6ZMZ0 732 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 CCDC81Q6ZN84 652 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 CATIPQ7Z7H3 387 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ZBTB46Q86UZ6 589 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 CD302Q8IX05 232 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 C12orf50Q8NA57 414 aaPredicted RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 PDZD8Q8NEN9 1154 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 VPS37AQ8NEZ2 397 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 RIN3Q8TB24 985 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 IQCDQ96DY2 449 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 EEF2KMTQ96G04 330 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ZNF184Q99676 751 aaPredicted RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 COQ7Q99807 217 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 MKNK1Q9BUB5 465 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 TBC1D10AQ9BXI6 508 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 NDFIP2Q9NV92 336 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 KLHL14Q9P2G3 628 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 WASF2Q9Y6W5 498 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 A2MP01023 1474 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ADGRL3Q9HAR2 1447 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 KANSL1LA0AUZ9 987 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 GOLGA8JA6NMD2 632 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 FAM196BA6NMK8 535 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 FAM47E-STBD1D6RA91 191 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 GOLGA8TH3BQL2 631 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 H3BUI4 141 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 BIRC5O15392 142 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ADCY6O43306 1168 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 RAD51CO43502 376 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 RNASEH1O60930 286 aaKnown RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 GUCY1B2O75343 617 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 STAM2O75886 525 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 UNC5CO95185 931 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 OCM2P0CE71 109 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 OCMP0CE72 109 aaPredicted RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 GOLGA8HP0CJ92 632 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 NR4A1P22736 598 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 CMA1P23946 247 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 RGS2P41220 211 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 GRIA2P42262 883 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 STT3AP46977 705 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 RASSF2P50749 326 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ZNF132P52740 706 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 KRT83P78385 493 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 IFI35P80217 286 aaPredicted RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 FLIIQ13045 1269 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 NMIQ13287 307 aaPredicted RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 LPIN1Q14693 890 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 TAF12Q16514 161 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ARL13BQ3SXY8 428 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 HSP90AA5PQ58FG0 334 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ANO1Q5XXA6 986 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 Q6ZNB5 142 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 ASRGL1Q7L266 308 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 SPERTQ8NA61 448 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 BRSK1Q8TDC3 778 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 DIS3LQ8TF46 1054 aaKnown RBP4.33□□□□□ -1.72
ATG3-207ENST00000494571 PMEPA1Q969W9 287 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 LRRC45Q96CN5 670 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 PHACTR3Q96KR7 559 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 MED15Q96RN5 788 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 GRIP2Q9C0E4 1043 aa4.33□□□□□ -1.72
ATG3-207ENST00000494571 DPH5Q9H2P9 285 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms