RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 FAM167AQ96KS9 214 aa16.15■□□□□ 0.18
PRPF40A-211ENST00000493468 TRAIPQ9BWF2 469 aa16.15■□□□□ 0.18
PRPF40A-211ENST00000493468 GLT8D2Q9H1C3 349 aa16.15■□□□□ 0.18
PRPF40A-211ENST00000493468 AKT3Q9Y243 479 aa16.15■□□□□ 0.18
PRPF40A-211ENST00000493468 TPRP12270 2363 aaKnown RBP16.15■□□□□ 0.18
PRPF40A-211ENST00000493468 IGLV3-22A0A075B6J6 115 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 IPO5O00410 1097 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 ZC3H11AO75152 810 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 GSPT1P15170 499 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 CHMLP26374 656 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 CLK2P49760 499 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 GPC3P51654 580 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 ADCY7P51828 1080 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 NAPAP54920 295 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 PTPN14Q15678 1187 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 LETM2Q2VYF4 491 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 TTC22Q5TAA0 569 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 TYW1BQ6NUM6 668 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 EFCAB12Q6NXP0 572 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 ZC3H14Q6PJT7 736 aaKnown RBP16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 FANCBQ8NB91 859 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 CMASQ8NFW8 434 aaPredicted RBP16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 RHOBTB2Q9BYZ6 727 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 CHST12Q9NRB3 414 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 TBC1D22BQ9NU19 505 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 DLL3Q9NYJ7 618 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 SLC12A7Q9Y666 1083 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 CNTNAP5Q8WYK1 1306 aa16.14■□□□□ 0.17
PRPF40A-211ENST00000493468 FAM86B1E9PN63 330 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 SGSM2O43147 1006 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 IGHDP01880 384 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 PSAPP07602 524 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 FAM86B2P0C5J1 330 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 ZNF76P36508 570 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 CLCN4P51793 760 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 SETQ01105 290 aaPredicted RBP16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 NONOQ15233 471 aaKnown RBP eCLIP16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 PLA2G4DQ86XP0 818 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 KIAA2013Q8IYS2 634 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 CCDC82Q8N4S0 544 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 FEZF2Q8TBJ5 459 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 CRYGNQ8WXF5 182 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 PCDHA10Q9Y5I2 948 aa16.13■□□□□ 0.17
PRPF40A-211ENST00000493468 KRBA1A5PL33 1030 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 GALTP07902 379 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 CYP3A4P08684 503 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 SKIP12755 728 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 PHKA2P46019 1235 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 TBC1D8BQ0IIM8 1120 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 CYP26C1Q6V0L0 522 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 BCL7CQ8WUZ0 217 aaPredicted RBP16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 RUBCNQ92622 972 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 NXPE3Q969Y0 559 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 EMILIN2Q9BXX0 1053 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 NRDE2Q9H7Z3 1164 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 RBM8AQ9Y5S9 174 aaKnown RBP16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 R4GN57 208 aa16.12■□□□□ 0.17
PRPF40A-211ENST00000493468 MIA3Q5JRA6 1907 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 NARSO43776 548 aaKnown RBP16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 PHLDB3Q6NSJ2 640 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 GLB1LQ6UWU2 654 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 LRRC71Q8N4P6 559 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 KLHL5Q96PQ7 755 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 ZNF577Q9BSK1 485 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 VN1R3Q9BXE9 311 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 TBC1D13Q9NVG8 400 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 RBM28Q9NW13 759 aaKnown RBP16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 BARHL2Q9NY43 387 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 EPS15L1Q9UBC2 864 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 GABBR1Q9UBS5 961 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 TCEAL9Q9UHQ7 104 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 ACACBO00763 2458 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 MTCL1Q9Y4B5 1905 aaKnown RBP16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 CACNA1IQ9P0X4 2223 aa16.11■□□□□ 0.17
PRPF40A-211ENST00000493468 SMCO2A6NFE2 343 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 LILRB3O75022 631 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 N4BP1O75113 896 aaKnown RBP16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 PAPLNO95428 1278 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 OATP04181 439 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 SRFP11831 508 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 CDC42EP1Q00587 391 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 NOMO2Q5JPE7 1267 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 MICU3Q86XE3 530 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 STAMQ92783 540 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 BORCS6Q96GS4 357 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 SCLT1Q96NL6 688 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 TBC1D17Q9HA65 648 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 WDR6Q9NNW5 1121 aaKnown RBP16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 DLGAP2Q9P1A6 1054 aa16.1■□□□□ 0.17
PRPF40A-211ENST00000493468 STK25O00506 426 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 ZNF623O75123 536 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 CFHP08603 1231 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 CNPP09543 421 aaKnown RBP16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 SP9P0CG40 484 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 FGFR4P22455 802 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 RFX1P22670 979 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 KLRC2P26717 231 aa16.09■□□□□ 0.17
PRPF40A-211ENST00000493468 RAB27AP51159 221 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms