RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 SYAP1Q96A49 352 aaPredicted RBP14.9□□□□□ -0.02
MSH6-208ENST00000493177 LRRC27Q9C0I9 530 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 NUP62CLQ9H1M0 184 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 TNMDQ9H2S6 317 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 CLSTN2Q9H4D0 955 aa14.9□□□□□ -0.02
MSH6-208ENST00000493177 DBR1Q9UK59 544 aaKnown RBP14.9□□□□□ -0.02
MSH6-208ENST00000493177 HBP1O60381 514 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 STBD1O95210 358 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 RARRES1P49788 294 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 NPEPPSP55786 919 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 ADAM17P78536 824 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 MBTPS1Q14703 1052 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 GPNMBQ14956 572 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 CCDC183Q5T5S1 534 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 IER5Q5VY09 327 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 TRAF7Q6Q0C0 670 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 ANO5Q75V66 913 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 SYT2Q8N9I0 419 aaPredicted RBP14.89□□□□□ -0.03
MSH6-208ENST00000493177 TRAPPC12Q8WVT3 735 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 APBB2Q92870 758 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 IFIH1Q9BYX4 1025 aaKnown RBP14.89□□□□□ -0.03
MSH6-208ENST00000493177 CERS4Q9HA82 394 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 CYP26B1Q9NR63 512 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 BMP2KQ9NSY1 1161 aaPredicted RBP14.89□□□□□ -0.03
MSH6-208ENST00000493177 CDY2AQ9Y6F7 541 aa14.89□□□□□ -0.03
MSH6-208ENST00000493177 USO1O60763 962 aaKnown RBP14.88□□□□□ -0.03
MSH6-208ENST00000493177 GHRP10912 638 aa14.88□□□□□ -0.03
MSH6-208ENST00000493177 SLC12A3P55017 1021 aa14.88□□□□□ -0.03
MSH6-208ENST00000493177 PLEKHG4Q58EX7 1191 aa14.88□□□□□ -0.03
MSH6-208ENST00000493177 PADI6Q6TGC4 694 aa14.88□□□□□ -0.03
MSH6-208ENST00000493177 TMCO2Q7Z6W1 182 aaPredicted RBP14.88□□□□□ -0.03
MSH6-208ENST00000493177 ZBTB10Q96DT7 871 aa14.88□□□□□ -0.03
MSH6-208ENST00000493177 NIFKQ9BYG3 293 aaKnown RBP14.88□□□□□ -0.03
MSH6-208ENST00000493177 BLZF1Q9H2G9 400 aa14.88□□□□□ -0.03
MSH6-208ENST00000493177 MYO9BQ13459 2157 aa14.88□□□□□ -0.03
MSH6-208ENST00000493177 MBLAC1A4D2B0 266 aaPredicted RBP14.87□□□□□ -0.03
MSH6-208ENST00000493177 MYMKA6NI61 221 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 GTPBP6O43824 516 aaPredicted RBP14.87□□□□□ -0.03
MSH6-208ENST00000493177 UPP2O95045 317 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 PRR29P0C7W0 189 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 CASP1P29466 404 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 POLGP54098 1239 aaPredicted RBP14.87□□□□□ -0.03
MSH6-208ENST00000493177 ASIC1P78348 528 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 MRPS6P82932 125 aaKnown RBP14.87□□□□□ -0.03
MSH6-208ENST00000493177 RAD51AP2Q09MP3 1159 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 TMEM62Q0P6H9 643 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 PNOCQ13519 176 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 POSTNQ15063 836 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 TCTN1Q2MV58 587 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 ZNF484Q5JVG2 852 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 RINT1Q6NUQ1 792 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.87□□□□□ -0.03
MSH6-208ENST00000493177 MAEAQ7L5Y9 396 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 DYMQ7RTS9 669 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 MICALL1Q8N3F8 863 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 RUSC1Q9BVN2 902 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 KBTBD4Q9NVX7 518 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 GINS2Q9Y248 185 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 TRPV2Q9Y5S1 764 aa14.87□□□□□ -0.03
MSH6-208ENST00000493177 COL1A2P08123 1366 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 SZT2Q5T011 3432 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 NPHP3-ACAD11A0A0J9YXS1 232 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 GJB5O95377 273 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 CYP11B2P19099 503 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 KLRC1P26715 233 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
MSH6-208ENST00000493177 TBC1D8BQ0IIM8 1120 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 CUL4BQ13620 913 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 FAM26DQ5JW98 314 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 MARCH8Q5T0T0 291 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 MTHFD1LQ6UB35 978 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 RPAINQ86UA6 219 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 ARNTL2Q8WYA1 636 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 DDX12PQ92771 950 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 ERCC4Q92889 916 aaPredicted RBP14.86□□□□□ -0.03
MSH6-208ENST00000493177 MTRQ99707 1265 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 ZHX3Q9H4I2 956 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 ATP6V0A4Q9HBG4 840 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 TMEM63CQ9P1W3 806 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 PPME1Q9Y570 386 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 PCDHA2Q9Y5H9 948 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 NLRC5Q86WI3 1866 aa14.86□□□□□ -0.03
MSH6-208ENST00000493177 COL4A4P53420 1690 aaPredicted RBP14.85□□□□□ -0.03
MSH6-208ENST00000493177 SMIM35A0A1B0GVV1 85 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 TBCAO75347 108 aaKnown RBP14.85□□□□□ -0.03
MSH6-208ENST00000493177 DGAT1O75907 488 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 SMC2O95347 1197 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 CHRNA1P02708 482 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 IDEP14735 1019 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 RFC5P40937 340 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 TARBP2Q15633 366 aaKnown RBP14.85□□□□□ -0.03
MSH6-208ENST00000493177 FAM102BQ5T8I3 360 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 TSHZ1Q6ZSZ6 1077 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 C1orf186Q6ZWK4 172 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 ELOA2Q8IYF1 753 aaPredicted RBP14.85□□□□□ -0.03
MSH6-208ENST00000493177 METTL13Q8N6R0 699 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 SLC7A3Q8WY07 619 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 SMARCE1Q969G3 411 aa14.85□□□□□ -0.03
MSH6-208ENST00000493177 CCDC47Q96A33 483 aaKnown RBP14.85□□□□□ -0.03
MSH6-208ENST00000493177 YME1L1Q96TA2 773 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms