RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 LCHNA4D1U4 455 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 FOXN1O15353 648 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 ZEB2O60315 1214 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 GAS7O60861 476 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 CUTAO60888 179 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 ZNF888P0CJ79 500 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 FAHP16930 419 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 SLC9A1P19634 815 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 SDHAP31040 664 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 KIF11P52732 1056 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 IL2P60568 153 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 IGBP1P78318 339 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 SMAD3P84022 425 aaKnown RBP4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 SKIDA1Q1XH10 827 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 BTBD8Q5XKL5 378 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 LAIR1Q6GTX8 287 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 CC2D1AQ6P1N0 951 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 PCSK4Q6UW60 755 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 SGMS1Q86VZ5 419 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 STPG3Q8N7X2 389 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 USP7Q93009 1102 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 FOXRED1Q96CU9 486 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 C16orf92Q96LL3 132 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 TTC1Q99614 292 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 PLA2G12BQ9BX93 195 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 MSL2Q9HCI7 577 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 SLC2A4RGQ9NR83 387 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 TLR9Q9NR96 1032 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 KCNH7Q9NS40 1196 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 DDX56Q9NY93 547 aaKnown RBP4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 BTBD7Q9P203 1132 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 PTGFRNQ9P2B2 879 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 MCM8Q9UJA3 840 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 APOBEC2Q9Y235 224 aaKnown RBP4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 ZKSCAN5Q9Y2L8 839 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 GIT1Q9Y2X7 761 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 NUB1Q9Y5A7 615 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 SPO11Q9Y5K1 396 aa4.06□□□□□ -1.76
HMGB1P30-201ENST00000492455 WASHC2CQ9Y4E1 1318 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 H7C1D1 291 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 CYP27B1O15528 508 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 BRINP1O60477 761 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 MPIG6BO95866 241 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 NUDT3O95989 172 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 PEX11BO96011 259 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 APPP05067 770 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 MMEP08473 750 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 ENO2P09104 434 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 IBSPP21815 317 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 KPNA1P52294 538 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 TMPRSS15P98073 1019 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 CRHR2Q13324 411 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 FAM50AQ14320 339 aaKnown RBP4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 TERF2Q15554 542 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 RNF151Q2KHN1 245 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 BRDTQ58F21 947 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 ZKSCAN2Q63HK3 967 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 RTN4RL1Q86UN2 441 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 SPATS2Q86XZ4 545 aaKnown RBP4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 ANKRD13AQ8IZ07 590 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 THEMISQ8N1K5 641 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 CLRN3Q8NCR9 226 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 ATL2Q8NHH9 583 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 WDR66Q8TBY9 1149 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 ASB15Q8WXK1 588 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 KCND1Q9NSA2 647 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 RIC8BQ9NVN3 520 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 PUF60Q9UHX1 559 aaKnown RBP4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 PTPN22Q9Y2R2 807 aa4.05□□□□□ -1.76
HMGB1P30-201ENST00000492455 PRKD3O94806 890 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 RHOBTB3O94955 611 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 ERBB2P04626 1255 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 AOAHP28039 575 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 POLD1P28340 1107 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 MC4RP32245 332 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 GJA4P35212 333 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 MSX2P35548 267 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 RRADP55042 308 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 ANAPC15P60006 121 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 ERVK-21P61565 698 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 PHC1P78364 1004 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 DBPQ10586 325 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 MTMR1Q13613 665 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 TMEM132BQ14DG7 1078 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 ATP13A4Q4VNC1 1196 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 RNF219Q5W0B1 726 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 CD276Q5ZPR3 534 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 BHLHA9Q7RTU4 235 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 NECAB2Q7Z6G3 386 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 SCYL1Q96KG9 808 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 ASPSCR1Q9BZE9 553 aa4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 ADARB2Q9NS39 739 aaKnown RBP4.04□□□□□ -1.76
HMGB1P30-201ENST00000492455 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 K7ESF4 209 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 MASP2O00187 686 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 PPM1GO15355 546 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 FOXP2O15409 715 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 HIP1RO75146 1068 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 RAB11FIP3O75154 756 aa4.03□□□□□ -1.76
HMGB1P30-201ENST00000492455 KATNA1O75449 491 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms