RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GOLGA8AA7E2F4 631 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 GOLGA8BA8MQT2 603 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 ZNF862O60290 1169 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 ZC3H11AO75152 810 aaKnown RBP eCLIP15.78■□□□□ 0.12
VARS-227ENST00000489979 CSDE1O75534 798 aaKnown RBP15.78■□□□□ 0.12
VARS-227ENST00000489979 OATP04181 439 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 CDC27P30260 824 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 PRR16Q569H4 304 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 CWF19L1Q69YN2 538 aaKnown RBP15.78■□□□□ 0.12
VARS-227ENST00000489979 TMC5Q6UXY8 1006 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 FLCNQ8NFG4 579 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 SLC22A17Q8WUG5 538 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 NLRP7Q8WX94 980 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 ANO2Q9NQ90 1003 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 CYP26B1Q9NR63 512 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 NRBP2Q9NSY0 501 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 FAM217BQ9NTX9 383 aaPredicted RBP15.78■□□□□ 0.12
VARS-227ENST00000489979 DACT1Q9NYF0 836 aa15.78■□□□□ 0.12
VARS-227ENST00000489979 WDR64B1ANS9 1081 aa15.77■□□□□ 0.12
VARS-227ENST00000489979 CTSAP10619 480 aa15.77■□□□□ 0.12
VARS-227ENST00000489979 EXOSC10Q01780 885 aaKnown RBP15.77■□□□□ 0.12
VARS-227ENST00000489979 PRKCEQ02156 737 aa15.77■□□□□ 0.12
VARS-227ENST00000489979 PFKFB3Q16875 520 aaPredicted RBP15.77■□□□□ 0.12
VARS-227ENST00000489979 DDX53Q86TM3 631 aaKnown RBP15.77■□□□□ 0.12
VARS-227ENST00000489979 CABP7Q86V35 215 aa15.77■□□□□ 0.12
VARS-227ENST00000489979 IGSF21Q96ID5 467 aa15.77■□□□□ 0.12
VARS-227ENST00000489979 IRAK3Q9Y616 596 aa15.77■□□□□ 0.12
VARS-227ENST00000489979 GVINP1Q7Z2Y8 2422 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 KLF18A0A0U1RQI7 1052 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 PHKA2P46019 1235 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 POLGP54098 1239 aaPredicted RBP15.76■□□□□ 0.11
VARS-227ENST00000489979 TBC1D8BQ0IIM8 1120 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 DRP2Q13474 957 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 GIT2Q14161 759 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 LONRF3Q496Y0 759 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 ADSSL1Q8N142 457 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 BCL7CQ8WUZ0 217 aaPredicted RBP15.76■□□□□ 0.11
VARS-227ENST00000489979 LPPQ93052 612 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 LENG9Q96B70 501 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 ACSF2Q96CM8 615 aaPredicted RBP15.76■□□□□ 0.11
VARS-227ENST00000489979 ZMYND12Q9H0C1 365 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 NRDE2Q9H7Z3 1164 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 C6orf50Q9HD87 102 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 DISC1Q9NRI5 854 aa15.76■□□□□ 0.11
VARS-227ENST00000489979 C2orf16Q68DN1 1984 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 ESYT2A0FGR8 921 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 PI15O43692 258 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 GALTP07902 379 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 NPR3P17342 541 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 CIITAP33076 1130 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 ADD1P35611 737 aaKnown RBP15.75■□□□□ 0.11
VARS-227ENST00000489979 ID4P47928 161 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 UGCGQ16739 394 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 RNF20Q5VTR2 975 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 DHX32Q7L7V1 743 aaKnown RBP15.75■□□□□ 0.11
VARS-227ENST00000489979 GPR149Q86SP6 731 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 REXO1Q8N1G1 1221 aaKnown RBP15.75■□□□□ 0.11
VARS-227ENST00000489979 GCOM2Q9BZD3 368 aaPredicted RBP15.75■□□□□ 0.11
VARS-227ENST00000489979 SFXN1Q9H9B4 322 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 CHST12Q9NRB3 414 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 TBC1D13Q9NVG8 400 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 NAP1L2Q9ULW6 460 aaPredicted RBP15.75■□□□□ 0.11
VARS-227ENST00000489979 INPP5FQ9Y2H2 1132 aa15.75■□□□□ 0.11
VARS-227ENST00000489979 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 MEIS3P2A8K0S8 358 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 CHMP2AO43633 222 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 AOC1P19801 751 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 TDGQ13569 410 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 PTPN14Q15678 1187 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 NOMO2Q5JPE7 1267 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 TWF2Q6IBS0 349 aaKnown RBP15.74■□□□□ 0.11
VARS-227ENST00000489979 GLB1LQ6UWU2 654 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 CCDC149Q6ZUS6 474 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 OTOP3Q7RTS5 596 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 ERMP1Q7Z2K6 904 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 PPFIBP1Q86W92 1011 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 YTHDC1Q96MU7 727 aaKnown RBP15.74■□□□□ 0.11
VARS-227ENST00000489979 VN1R3Q9BXE9 311 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 DUSP12Q9UNI6 340 aa15.74■□□□□ 0.11
VARS-227ENST00000489979 A0A087WZ62 844 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 CARNS1A5YM72 827 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 MSH4O15457 936 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 OFD1O75665 1012 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 SLC11A1P49279 550 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 RNASELQ05823 741 aaKnown RBP15.73■□□□□ 0.11
VARS-227ENST00000489979 ANGPT1Q15389 498 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 TARBP2Q15633 366 aaKnown RBP15.73■□□□□ 0.11
VARS-227ENST00000489979 ADCK5Q3MIX3 580 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 CCDC105Q8IYK2 499 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 CCDC12Q8WUD4 166 aaPredicted RBP15.73■□□□□ 0.11
VARS-227ENST00000489979 RSPH1Q8WYR4 309 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 KLHL5Q96PQ7 755 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 RTP3Q9BQQ7 232 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 FDXACB1Q9BRP7 624 aaPredicted RBP15.73■□□□□ 0.11
VARS-227ENST00000489979 TRAIPQ9BWF2 469 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 GBP3Q9H0R5 595 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 KCNK12Q9HB15 430 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 FAM105AQ9NUU6 356 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 DNAJB4Q9UDY4 337 aa15.73■□□□□ 0.11
VARS-227ENST00000489979 FBXL21Q9UKT6 434 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms