RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 IFT74Q96LB3 600 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 DRC1Q96MC2 740 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 PLIN2Q99541 437 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 IFIH1Q9BYX4 1025 aaKnown RBP13.8□□□□□ -0.2
COL4A5-206ENST00000489230 GINS2Q9Y248 185 aa13.8□□□□□ -0.2
COL4A5-206ENST00000489230 PRUNE2Q8WUY3 3088 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 USO1O60763 962 aaKnown RBP13.79□□□□□ -0.2
COL4A5-206ENST00000489230 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 ACRP10323 421 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 PLCG1P19174 1290 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 SCP2P22307 547 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 STAT6P42226 847 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 EPHB4P54760 987 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 PAK2Q13177 524 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 LPIN1Q14693 890 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 GPNMBQ14956 572 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 GRIN2CQ14957 1233 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 RESP18Q5W5W9 173 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 C1orf186Q6ZWK4 172 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 USP49Q70CQ1 688 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 DBF4BQ8NFT6 615 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 PHOSPHO2Q8TCD6 241 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 LARP4BQ92615 738 aaKnown RBP13.79□□□□□ -0.2
COL4A5-206ENST00000489230 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.79□□□□□ -0.2
COL4A5-206ENST00000489230 NFKBIZQ9BYH8 718 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 USP25Q9UHP3 1055 aa13.79□□□□□ -0.2
COL4A5-206ENST00000489230 TRIP12Q14669 1992 aaPredicted RBP13.79□□□□□ -0.2
COL4A5-206ENST00000489230 A0A1W2PQ27 194 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 A0A1W2PQ64 194 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 A0A1W2PQD8 194 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 KRT18P05783 430 aaKnown RBP13.78□□□□□ -0.2
COL4A5-206ENST00000489230 GHRP10912 638 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 DARSP14868 501 aaKnown RBP13.78□□□□□ -0.2
COL4A5-206ENST00000489230 SFPQP23246 707 aaKnown RBP eCLIP13.78□□□□□ -0.2
COL4A5-206ENST00000489230 PHKA2P46019 1235 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 KCNJ6P48051 423 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 SMTNP53814 917 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 SLC12A3P55017 1021 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 DRP2Q13474 957 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 MBTPS1Q14703 1052 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 TIFAQ96CG3 184 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 GAS2L1Q99501 681 aaPredicted RBP13.78□□□□□ -0.2
COL4A5-206ENST00000489230 OSMRQ99650 979 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 PANK2Q9BZ23 570 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
COL4A5-206ENST00000489230 C2orf40Q9H1Z8 148 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 ZNF576Q9H609 170 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 MAGEF1Q9HAY2 307 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 CDHR5Q9HBB8 845 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 XPNPEP1Q9NQW7 623 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 CHST12Q9NRB3 414 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 PADI3Q9ULW8 664 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 SLC4A7Q9Y6M7 1214 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 PHLPP2Q6ZVD8 1323 aa13.78□□□□□ -0.2
COL4A5-206ENST00000489230 A0A087WZ62 844 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 TNFRSF10AO00220 468 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 ZSCAN20P17040 1043 aaPredicted RBP13.77□□□□□ -0.21
COL4A5-206ENST00000489230 ABCD1P33897 745 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 EFNA5P52803 228 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 PTENP60484 403 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 NFX1Q12986 1120 aaKnown RBP13.77□□□□□ -0.21
COL4A5-206ENST00000489230 WDR81Q562E7 1941 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 MAEAQ7L5Y9 396 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 OTOP2Q7RTS6 562 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 KCNK18Q7Z418 384 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 ZBTB8OSQ8IWT0 167 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 RNF149Q8NC42 400 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 NLRP4Q96MN2 994 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 FDXACB1Q9BRP7 624 aaPredicted RBP13.77□□□□□ -0.21
COL4A5-206ENST00000489230 NTPCRQ9BSD7 190 aaKnown RBP13.77□□□□□ -0.21
COL4A5-206ENST00000489230 BLOC1S4Q9NUP1 217 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 LARSQ9P2J5 1176 aaKnown RBP13.77□□□□□ -0.21
COL4A5-206ENST00000489230 KCNH3Q9ULD8 1083 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 ODF2LQ9ULJ1 636 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 ST3GAL5Q9UNP4 418 aa13.77□□□□□ -0.21
COL4A5-206ENST00000489230 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
COL4A5-206ENST00000489230 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 H0YCG3 227 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 AMHP03971 560 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 GLRA2P23416 452 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 AXLP30530 894 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 CD52P31358 61 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 NAMPTP43490 491 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 DHX8Q14562 1220 aaKnown RBP13.76□□□□□ -0.21
COL4A5-206ENST00000489230 MCM6Q14566 821 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 GPBP1Q86WP2 473 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 IFNLR1Q8IU57 520 aaPredicted RBP13.76□□□□□ -0.21
COL4A5-206ENST00000489230 KSR1Q8IVT5 923 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 PDILTQ8N807 584 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 DEPTORQ8TB45 409 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 PPM1EQ8WY54 764 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 AGO3Q9H9G7 860 aaKnown RBP13.76□□□□□ -0.21
COL4A5-206ENST00000489230 IFT122Q9HBG6 1241 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 DACT1Q9NYF0 836 aa13.76□□□□□ -0.21
COL4A5-206ENST00000489230 ENPP3O14638 875 aa13.75□□□□□ -0.21
COL4A5-206ENST00000489230 POLR2DO15514 142 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms