RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 GTF2A2P52657 109 aa9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 SH3RF3Q8TEJ3 882 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 APPBP2Q92624 585 aa9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 OPTNQ96CV9 577 aa9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 Q96M66 194 aa9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 DEPDC7Q96QD5 511 aa9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 GDF15Q99988 308 aa9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 CRNKL1Q9BZJ0 848 aaKnown RBP9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 CWC22Q9HCG8 908 aaKnown RBP9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 ZC3H7BQ9UGR2 993 aaKnown RBP9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 ZSWIM8A7E2V4 1837 aa9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 DOCK2Q92608 1830 aa9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 RPTORQ8N122 1335 aa9.54□□□□□ -0.88
TRAPPC12-221ENST00000489032 CCL15-CCL14A0A0B4J2E2 113 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 HIP1O00291 1037 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 TLR2O60603 784 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 COBLO75128 1261 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 USP2O75604 605 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 EPHX1P07099 455 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 HOXD10P28358 340 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 CLCN7P51798 805 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 RHBDL3P58872 404 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 DYNLL1P63167 89 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 UBXN2AP68543 259 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 NMIQ13287 307 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 SERINC3Q13530 473 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 CCL15Q16663 113 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 SV2CQ496J9 727 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 ADGRA1Q86SQ6 560 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 AMOTL1Q8IY63 956 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 PLD6Q8N2A8 252 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 RAET1EQ8TD07 263 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 U2AF1L4Q8WU68 220 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 TGFBRAP1Q8WUH2 860 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 BRI3BPQ8WY22 251 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 TMEM39BQ9GZU3 492 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 PRDM14Q9GZV8 571 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 SNX11Q9Y5W9 270 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 SSC5DA1L4H1 1573 aa9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 MYO5AQ9Y4I1 1855 aaKnown RBP9.53□□□□□ -0.88
TRAPPC12-221ENST00000489032 RPAP1Q9BWH6 1393 aaPredicted RBP9.52□□□□□ -0.88
TRAPPC12-221ENST00000489032 TCRBV5S4A2TA0A5A2 114 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 H3BS24 57 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 MBD4O95243 580 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 HLA-DOAP06340 250 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 CAPN2P17655 700 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 GNAT2P19087 354 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 TTC22Q5TAA0 569 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 MAPKAPK5Q8IW41 473 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 TDHQ8IZJ6 230 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 FAM43AQ8N2R8 423 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 ENOX1Q8TC92 643 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 FGD4Q96M96 766 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 OSBPL5Q9H0X9 879 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 EPN3Q9H201 632 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 DHX36Q9H2U1 1008 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 GP6Q9HCN6 339 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 WHRNQ9P202 907 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 ZSWIM5Q9P217 1185 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 SRRDQ9UH36 339 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 RNF112Q9ULX5 631 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 ZNF451Q9Y4E5 1061 aa9.52□□□□□ -0.89
TRAPPC12-221ENST00000489032 RFX7Q2KHR2 1363 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 VCANP13611 3396 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 MYH7P12883 1935 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 NOP56O00567 594 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 SUSD5O60279 629 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 SGPL1O95470 568 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 NKPD1Q17RQ9 610 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 MTERF2Q49AM1 385 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 SPACA3Q8IXA5 215 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 LCORLQ8N3X6 602 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 HRASLS5Q96KN8 279 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 HSPA12BQ96MM6 686 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 TEPSINQ96N21 525 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 RIOK1Q9BRS2 568 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 ZNF341Q9BYN7 854 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 GPR62Q9BZJ7 368 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 ARMT1Q9H993 441 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 ZCCHC17Q9NP64 241 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 HELLSQ9NRZ9 838 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 DIAPH3Q9NSV4 1193 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 GFOD1Q9NXC2 390 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 SNTG2Q9NY99 539 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 PRR13Q9NZ81 148 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 SLC4A4Q9Y6R1 1079 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 FLT1P17948 1338 aa9.51□□□□□ -0.89
TRAPPC12-221ENST00000489032 AK9Q5TCS8 1911 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 OTOFQ9HC10 1997 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 SSU72P8A0A1W2PR75 194 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 GPAA1O43292 621 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 TFRCP02786 760 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 APPP05067 770 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 SDSP20132 328 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 PLA2G5P39877 138 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 PSMC4P43686 418 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 SNW1Q13573 536 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 ZMYM1Q5SVZ6 1142 aa9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 CWF19L1Q69YN2 538 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-221ENST00000489032 CRACR2BQ8N4Y2 399 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms