RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 CSDE1O75534 798 aaKnown RBP17.38■□□□□ 0.37
MCF2L-228ENST00000487354 CXCL14O95715 111 aa17.38■□□□□ 0.37
MCF2L-228ENST00000487354 PSAPP07602 524 aa17.38■□□□□ 0.37
MCF2L-228ENST00000487354 CTSAP10619 480 aa17.38■□□□□ 0.37
MCF2L-228ENST00000487354 ZSCAN20P17040 1043 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-228ENST00000487354 CEP89Q96ST8 783 aa17.38■□□□□ 0.37
MCF2L-228ENST00000487354 MAP7D2Q96T17 732 aa17.38■□□□□ 0.37
MCF2L-228ENST00000487354 ESYT1Q9BSJ8 1104 aa17.38■□□□□ 0.37
MCF2L-228ENST00000487354 EP300Q09472 2414 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-228ENST00000487354 ESYT2A0FGR8 921 aa17.37■□□□□ 0.37
MCF2L-228ENST00000487354 OATP04181 439 aa17.37■□□□□ 0.37
MCF2L-228ENST00000487354 SETQ01105 290 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-228ENST00000487354 PRKCEQ02156 737 aa17.37■□□□□ 0.37
MCF2L-228ENST00000487354 TARBP2Q15633 366 aaKnown RBP17.37■□□□□ 0.37
MCF2L-228ENST00000487354 PFKFB3Q16875 520 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-228ENST00000487354 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
MCF2L-228ENST00000487354 DDX53Q86TM3 631 aaKnown RBP17.37■□□□□ 0.37
MCF2L-228ENST00000487354 LPPQ93052 612 aa17.37■□□□□ 0.37
MCF2L-228ENST00000487354 NKD2Q969F2 451 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-228ENST00000487354 TMEM169Q96HH4 297 aa17.37■□□□□ 0.37
MCF2L-228ENST00000487354 IGSF21Q96ID5 467 aa17.37■□□□□ 0.37
MCF2L-228ENST00000487354 FAM167AQ96KS9 214 aa17.37■□□□□ 0.37
MCF2L-228ENST00000487354 MRPL9Q9BYD2 267 aaKnown RBP17.37■□□□□ 0.37
MCF2L-228ENST00000487354 GLT8D2Q9H1C3 349 aa17.37■□□□□ 0.37
MCF2L-228ENST00000487354 DBR1Q9UK59 544 aaKnown RBP17.37■□□□□ 0.37
MCF2L-228ENST00000487354 ZBTB43O43298 467 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 ZC3H11AO75152 810 aaKnown RBP eCLIP17.36■□□□□ 0.37
MCF2L-228ENST00000487354 AOC1P19801 751 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 CIITAP33076 1130 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 PHKA2P46019 1235 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 PTPN14Q15678 1187 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 TMC5Q6UXY8 1006 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 CCDC105Q8IYK2 499 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 ADSSL1Q8N142 457 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 TRAIPQ9BWF2 469 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 ZMYND12Q9H0C1 365 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 NRDE2Q9H7Z3 1164 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 CYP26B1Q9NR63 512 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 TBC1D13Q9NVG8 400 aa17.36■□□□□ 0.37
MCF2L-228ENST00000487354 MTCL1Q9Y4B5 1905 aaKnown RBP17.35■□□□□ 0.37
MCF2L-228ENST00000487354 GOLGA8AA7E2F4 631 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 GOLGA8BA8MQT2 603 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 N4BP1O75113 896 aaKnown RBP17.35■□□□□ 0.37
MCF2L-228ENST00000487354 STBD1O95210 358 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 GALTP07902 379 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 CA8P35219 290 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 ALDH7A1P49419 539 aaKnown RBP17.35■□□□□ 0.37
MCF2L-228ENST00000487354 POLGP54098 1239 aaPredicted RBP17.35■□□□□ 0.37
MCF2L-228ENST00000487354 ADCK5Q3MIX3 580 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 PRR16Q569H4 304 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 ATAT1Q5SQI0 421 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 ERMP1Q7Z2K6 904 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 GPR149Q86SP6 731 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 ZNF710Q8N1W2 664 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 PLCD3Q8N3E9 789 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 DNAJB4Q9UDY4 337 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 DUSP12Q9UNI6 340 aa17.35■□□□□ 0.37
MCF2L-228ENST00000487354 IGKV6-21A0A0C4DH24 114 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 TMEM150BA6NC51 233 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 WDR64B1ANS9 1081 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 TMOD1P28289 359 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 SLC11A1P49279 550 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 OTOGLQ3ZCN5 2332 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 ARID2Q68CP9 1835 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 SYNE3Q6ZMZ3 975 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 RASEFQ8IZ41 740 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 FLCNQ8NFG4 579 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 MFSD1Q9H3U5 465 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 DACT1Q9NYF0 836 aa17.34■□□□□ 0.37
MCF2L-228ENST00000487354 NID2Q14112 1375 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 KLF18A0A0U1RQI7 1052 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 MSH4O15457 936 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 LILRB3O75022 631 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 ADD1P35611 737 aaKnown RBP17.33■□□□□ 0.36
MCF2L-228ENST00000487354 ID4P47928 161 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 CLCN4P51793 760 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 TDGQ13569 410 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 ANGPT1Q15389 498 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 LONRF3Q496Y0 759 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 REXO1Q8N1G1 1221 aaKnown RBP17.33■□□□□ 0.36
MCF2L-228ENST00000487354 NLRP7Q8WX94 980 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 GJA10Q969M2 543 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 SFXN1Q9H9B4 322 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 KCNK12Q9HB15 430 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 ANO2Q9NQ90 1003 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 CHST12Q9NRB3 414 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 DISC1Q9NRI5 854 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 DOCK6Q96HP0 2047 aa17.33■□□□□ 0.36
MCF2L-228ENST00000487354 TDRD15B5MCY1 1934 aaKnown RBP17.32■□□□□ 0.36
MCF2L-228ENST00000487354 NARSO43776 548 aaKnown RBP17.32■□□□□ 0.36
MCF2L-228ENST00000487354 OFD1O75665 1012 aa17.32■□□□□ 0.36
MCF2L-228ENST00000487354 AFF1P51825 1210 aaKnown RBP17.32■□□□□ 0.36
MCF2L-228ENST00000487354 RCAN1P53805 252 aa17.32■□□□□ 0.36
MCF2L-228ENST00000487354 GIT2Q14161 759 aa17.32■□□□□ 0.36
MCF2L-228ENST00000487354 NOMO2Q5JPE7 1267 aa17.32■□□□□ 0.36
MCF2L-228ENST00000487354 B3GNT9Q6UX72 402 aa17.32■□□□□ 0.36
MCF2L-228ENST00000487354 CCDC149Q6ZUS6 474 aa17.32■□□□□ 0.36
MCF2L-228ENST00000487354 DHX32Q7L7V1 743 aaKnown RBP17.32■□□□□ 0.36
MCF2L-228ENST00000487354 CABP7Q86V35 215 aa17.32■□□□□ 0.36
MCF2L-228ENST00000487354 ZNF280BQ86YH2 543 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms