RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 MTAPQ13126 283 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
TRIM56-204ENST00000487252 VPS53Q5VIR6 699 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 MTHFD1LQ6UB35 978 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 FCHSD1Q86WN1 690 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 ABI1Q8IZP0 508 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 BCL7CQ8WUZ0 217 aaPredicted RBP13.44□□□□□ -0.26
TRIM56-204ENST00000487252 TRAPPC12Q8WVT3 735 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 ZNF707Q96C28 371 aaPredicted RBP13.44□□□□□ -0.26
TRIM56-204ENST00000487252 NELL2Q99435 816 aa13.44□□□□□ -0.26
TRIM56-204ENST00000487252 LSM14BQ9BX40 385 aaKnown RBP13.44□□□□□ -0.26
TRIM56-204ENST00000487252 ADAMTS20P59510 1910 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 CYSRT1A8MQ03 144 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 TARSP26639 723 aaKnown RBP13.43□□□□□ -0.26
TRIM56-204ENST00000487252 PLCB4Q15147 1175 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 ZNF598Q86UK7 904 aaKnown RBP13.43□□□□□ -0.26
TRIM56-204ENST00000487252 ECHDC2Q86YB7 292 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 KIAA0319LQ8IZA0 1049 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 FGF14Q92915 247 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 ADAM33Q9BZ11 813 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 MAN1C1Q9NR34 630 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 TOMM22Q9NS69 142 aa13.43□□□□□ -0.26
TRIM56-204ENST00000487252 CARNS1A5YM72 827 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 SHISA7A6NL88 538 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 CD72P21854 359 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 KLRC2P26717 231 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 PCNX4Q63HM2 1172 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 ZNF687Q8N1G0 1237 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 TNPO1Q92973 898 aaKnown RBP13.42□□□□□ -0.26
TRIM56-204ENST00000487252 EMILIN2Q9BXX0 1053 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 MRPL9Q9BYD2 267 aaKnown RBP13.42□□□□□ -0.26
TRIM56-204ENST00000487252 IGSF5Q9NSI5 407 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 GINS2Q9Y248 185 aa13.42□□□□□ -0.26
TRIM56-204ENST00000487252 ZFP37Q9Y6Q3 630 aaPredicted RBP13.42□□□□□ -0.26
TRIM56-204ENST00000487252 EVPLQ92817 2033 aa13.41□□□□□ -0.26
TRIM56-204ENST00000487252 ZBTB5O15062 677 aa13.41□□□□□ -0.26
TRIM56-204ENST00000487252 INPPL1O15357 1258 aa13.41□□□□□ -0.26
TRIM56-204ENST00000487252 NCAM2O15394 837 aa13.41□□□□□ -0.26
TRIM56-204ENST00000487252 PCP11498 1178 aaKnown RBP13.41□□□□□ -0.26
TRIM56-204ENST00000487252 CRYBB1P53674 252 aaPredicted RBP13.41□□□□□ -0.26
TRIM56-204ENST00000487252 PARM1Q6UWI2 310 aa13.41□□□□□ -0.26
TRIM56-204ENST00000487252 PRR23BQ6ZRT6 265 aa13.41□□□□□ -0.26
TRIM56-204ENST00000487252 RSPH1Q8WYR4 309 aa13.41□□□□□ -0.26
TRIM56-204ENST00000487252 LRRCC1Q9C099 1032 aa13.41□□□□□ -0.26
TRIM56-204ENST00000487252 FAM217BQ9NTX9 383 aaPredicted RBP13.41□□□□□ -0.26
TRIM56-204ENST00000487252 MTCL1Q9Y4B5 1905 aaKnown RBP13.41□□□□□ -0.26
TRIM56-204ENST00000487252 A0A0U1RQF3 1178 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 HRO43593 1189 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 DHX16O60231 1041 aaKnown RBP13.4□□□□□ -0.26
TRIM56-204ENST00000487252 GPR32O75388 356 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 RFPL2O75678 378 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 FGAP02671 866 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 GALTP07902 379 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 PARP1P09874 1014 aaKnown RBP13.4□□□□□ -0.26
TRIM56-204ENST00000487252 SIM2Q14190 667 aaPredicted RBP13.4□□□□□ -0.26
TRIM56-204ENST00000487252 STPG1Q5TH74 334 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 TSHZ3Q63HK5 1081 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 PLPPR4Q7Z2D5 763 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 HELQQ8TDG4 1101 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 ZCCHC14Q8WYQ9 949 aaKnown RBP13.4□□□□□ -0.26
TRIM56-204ENST00000487252 SMG7Q92540 1137 aaKnown RBP13.4□□□□□ -0.26
TRIM56-204ENST00000487252 GPRASP2Q96D09 838 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 CHRDQ9H2X0 955 aa13.4□□□□□ -0.26
TRIM56-204ENST00000487252 DOCK6Q96HP0 2047 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 SMARCA5O60264 1052 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-204ENST00000487252 ZNF806P0C7X5 589 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 KLRC1P26715 233 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 PFKPQ01813 784 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 ADCY1Q08828 1119 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 AASDHQ4L235 1098 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-204ENST00000487252 PSAPL1Q6NUJ1 521 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 NLRX1Q86UT6 975 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 STAG2Q8N3U4 1231 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 ST13P5Q8NFI4 369 aaPredicted RBP13.39□□□□□ -0.27
TRIM56-204ENST00000487252 HDAC7Q8WUI4 952 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 OSMRQ99650 979 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 IER2Q9BTL4 223 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 STK39Q9UEW8 545 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 DPP7Q9UHL4 492 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 RBM19Q9Y4C8 960 aaKnown RBP13.39□□□□□ -0.27
TRIM56-204ENST00000487252 ZMYM6O95789 1325 aa13.39□□□□□ -0.27
TRIM56-204ENST00000487252 F5P12259 2224 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 ZC3H11AO75152 810 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■□□□□ 8.9
TRIM56-204ENST00000487252 C1RP00736 705 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 NCLP19338 710 aaKnown RBP13.38□□□□□ -0.27
TRIM56-204ENST00000487252 SPINK2P20155 84 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 CNR2P34972 360 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 SF3A2Q15428 464 aaKnown RBP13.38□□□□□ -0.27
TRIM56-204ENST00000487252 KIZQ2M2Z5 673 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 SLC35G1Q2M3R5 365 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 GET4Q7L5D6 327 aaPredicted RBP13.38□□□□□ -0.27
TRIM56-204ENST00000487252 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.38□□□□□ -0.27
TRIM56-204ENST00000487252 CDHR1Q96JP9 859 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 NT5C3AQ9H0P0 336 aa13.38□□□□□ -0.27
TRIM56-204ENST00000487252 NRDE2Q9H7Z3 1164 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms