RNA–Protein interactions for RNA: ENST00000486144.1

SERF2-216, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-216	ENST00000486144		H3BNC9	293 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	NCK2	O43639	380 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	RPLP2	P05387	115 aa	Known RBP	13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	PTMS	P20962	102 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	DDIT3	P35638	169 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	RARRES1	P49788	294 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	GPC3	P51654	580 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	NLRP11	P59045	1033 aa	Known RBP	13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	TSHZ1	Q6ZSZ6	1077 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	KSR1	Q8IVT5	923 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	FAM178B	Q8IXR5	827 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	USP28	Q96RU2	1077 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	OSMR	Q99650	979 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	ADAMTS10	Q9H324	1103 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	XPNPEP1	Q9NQW7	623 aa		13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	NOC2L	Q9Y3T9	749 aa	Known RBP	13.56	□□□□□ -0.24
SERF2-216	ENST00000486144	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.55	□□□□□ -0.24
SERF2-216	ENST00000486144		M0QZ92	97 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	ALAD	P13716	330 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	CCT6A	P40227	531 aa	Known RBP	13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	POLG	P54098	1239 aa	Predicted RBP	13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	CEBPZ	Q03701	1054 aa	Known RBP	13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	GPM6B	Q13491	265 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	EMC2	Q15006	297 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	OTUD6A	Q7L8S5	288 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	TMEM192	Q8IY95	271 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	GJD3	Q8N144	294 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	ERMN	Q8TAM6	284 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	SNX29	Q8TEQ0	813 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	LINC01599	Q8WXQ3	324 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	TMEM143	Q96AN5	459 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	ANKEF1	Q9NU02	776 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	PADI3	Q9ULW8	664 aa		13.55	□□□□□ -0.24
SERF2-216	ENST00000486144	CSDE1	O75534	798 aa	Known RBP	13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	UPP2	O95045	317 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	RB1	P06400	928 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	ZSCAN22	P10073	491 aa	Predicted RBP	13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	TMOD1	P28289	359 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	RFC5	P40937	340 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	CRYBB1	P53674	252 aa	Predicted RBP	13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	HAUS3	Q68CZ6	603 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	KCNK18	Q7Z418	384 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	FAM228A	Q86W67	206 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	FIBCD1	Q8N539	461 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	PABPC5	Q96DU9	382 aa	Known RBP	13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	GBP4	Q96PP9	640 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	PNMA5	Q96PV4	448 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	MAP7D2	Q96T17	732 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	TMX1	Q9H3N1	280 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	NSUN3	Q9H649	340 aa	Known RBP	13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	ERVK-5	Q9HDB9	667 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	KIAA1024	Q9UPX6	916 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	ZDHHC9	Q9Y397	364 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	SQOR	Q9Y6N5	450 aa		13.54	□□□□□ -0.24
SERF2-216	ENST00000486144	ATG2A	Q2TAZ0	1938 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144		A0A087WZ62	844 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	GRXCR2	A6NFK2	248 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	PRR33	A8MZF0	331 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144		E9PMD0	336 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	MGEA5	O60502	916 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	USO1	O60763	962 aa	Known RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	F13A1	P00488	732 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	XRCC6	P12956	609 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	FGFR4	P22455	802 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	MARCKS	P29966	332 aa	Predicted RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	HOXD11	P31277	338 aa	Predicted RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	SSTR3	P32745	418 aa	Predicted RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	NFKBIB	Q15653	356 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	RHPN2	Q8IUC4	686 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	LRRC15	Q8TF66	581 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	SLC7A3	Q8WY07	619 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	NACC1	Q96RE7	527 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	PLIN2	Q99541	437 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	MTR	Q99707	1265 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	RAB34	Q9BZG1	259 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	LMAN2L	Q9H0V9	348 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	DDX19A	Q9NUU7	478 aa	Known RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	PRKAG3	Q9UGI9	489 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	FBXO2	Q9UK22	296 aa	Predicted RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	DBR1	Q9UK59	544 aa	Known RBP	13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	PPME1	Q9Y570	386 aa		13.53	□□□□□ -0.24
SERF2-216	ENST00000486144	C5orf67	F2Z3F1	127 aa		13.52	□□□□□ -0.25
SERF2-216	ENST00000486144	ENPP3	O14638	875 aa		13.52	□□□□□ -0.25
SERF2-216	ENST00000486144	RPS6KA5	O75582	802 aa		13.52	□□□□□ -0.25
SERF2-216	ENST00000486144	BMP15	O95972	392 aa		13.52	□□□□□ -0.25
SERF2-216	ENST00000486144	MUT	P22033	750 aa		13.52	□□□□□ -0.25
SERF2-216	ENST00000486144	DNM2	P50570	870 aa		13.52	□□□□□ -0.25
SERF2-216	ENST00000486144	NFX1	Q12986	1120 aa	Known RBP	13.52	□□□□□ -0.25
SERF2-216	ENST00000486144	PAK2	Q13177	524 aa		13.52	□□□□□ -0.25
SERF2-216	ENST00000486144	COL19A1	Q14993	1142 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms