RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 IFT74Q96LB3 600 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 NIFKQ9BYG3 293 aaKnown RBP18.28■□□□□ 0.52
CTSA-207ENST00000484855 PCIF1Q9H4Z3 704 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 AZI2Q9H6S1 392 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 NHEJ1Q9H9Q4 299 aaPredicted RBP18.28■□□□□ 0.52
CTSA-207ENST00000484855 NLRC4Q9NPP4 1024 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 LZTFL1Q9NQ48 299 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 NOP56O00567 594 aaKnown RBP18.28■□□□□ 0.52
CTSA-207ENST00000484855 POLR2FP61218 127 aaKnown RBP18.28■□□□□ 0.52
CTSA-207ENST00000484855 EXOC3L4Q17RC7 722 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 ZNF792Q3KQV3 632 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 CCDC170Q8IYT3 715 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 ABRAQ8N0Z2 381 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 TMEM174Q8WUU8 243 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 PTPN18Q99952 460 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 NTPCRQ9BSD7 190 aaKnown RBP18.28■□□□□ 0.52
CTSA-207ENST00000484855 NRBP2Q9NSY0 501 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 DNAI1Q9UI46 699 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 PHLPP2Q6ZVD8 1323 aa18.28■□□□□ 0.52
CTSA-207ENST00000484855 TTLL4Q14679 1199 aa18.27■□□□□ 0.52
CTSA-207ENST00000484855 PPP2R5AQ15172 486 aa18.27■□□□□ 0.52
CTSA-207ENST00000484855 CCDC62Q6P9F0 684 aa18.27■□□□□ 0.52
CTSA-207ENST00000484855 GBP6Q6ZN66 633 aa18.27■□□□□ 0.52
CTSA-207ENST00000484855 DHX37Q8IY37 1157 aaKnown RBP18.27■□□□□ 0.52
CTSA-207ENST00000484855 GPR20Q99678 358 aa18.27■□□□□ 0.52
CTSA-207ENST00000484855 CBWD1Q9BRT8 395 aa18.27■□□□□ 0.52
CTSA-207ENST00000484855 NUCKS1Q9H1E3 243 aaKnown RBP18.27■□□□□ 0.52
CTSA-207ENST00000484855 GANQ9H2C0 597 aa18.27■□□□□ 0.52
CTSA-207ENST00000484855 DHX33Q9H6R0 707 aaKnown RBP18.27■□□□□ 0.52
CTSA-207ENST00000484855 A0A0U1RQJ8 604 aa18.27■□□□□ 0.51
CTSA-207ENST00000484855 STRNO43815 780 aa18.27■□□□□ 0.51
CTSA-207ENST00000484855 TXNP10599 105 aaKnown RBP18.27■□□□□ 0.51
CTSA-207ENST00000484855 HSDL1Q3SXM5 330 aa18.27■□□□□ 0.51
CTSA-207ENST00000484855 ATRIPQ8WXE1 791 aa18.27■□□□□ 0.51
CTSA-207ENST00000484855 SLC7A3Q8WY07 619 aa18.27■□□□□ 0.51
CTSA-207ENST00000484855 FAM167AQ96KS9 214 aa18.27■□□□□ 0.51
CTSA-207ENST00000484855 PLCB1Q9NQ66 1216 aa18.27■□□□□ 0.51
CTSA-207ENST00000484855 HSPBP1Q9NZL4 362 aa18.27■□□□□ 0.51
CTSA-207ENST00000484855 ADGRA3Q8IWK6 1321 aa18.27■□□□□ 0.51
CTSA-207ENST00000484855 GTPBP10A4D1E9 387 aaKnown RBP18.26■□□□□ 0.51
CTSA-207ENST00000484855 ITGBL1O95965 494 aaPredicted RBP18.26■□□□□ 0.51
CTSA-207ENST00000484855 KRT13P13646 458 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 SLC9A1P19634 815 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 APBA1Q02410 837 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 BFSP1Q12934 665 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 FAM110CQ1W6H9 321 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 ARHGAP29Q52LW3 1261 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 CHADLQ6NUI6 762 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 XXYLT1Q8NBI6 393 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 RDH13Q8NBN7 331 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 SCFD2Q8WU76 684 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 SPATA33Q96N06 139 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 PDGFCQ9NRA1 345 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 GCNT4Q9P109 453 aa18.26■□□□□ 0.51
CTSA-207ENST00000484855 REXO2Q9Y3B8 237 aaKnown RBP18.26■□□□□ 0.51
CTSA-207ENST00000484855 H0YCG3 227 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 PON1P27169 355 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 RFC5P40937 340 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 GNG11P61952 73 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 GPR142Q7Z601 462 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 GLG1Q92896 1179 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 COPS5Q92905 334 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 TMEM143Q96AN5 459 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 CCDC42Q96M95 316 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 CEP89Q96ST8 783 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 KCNG1Q9UIX4 513 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 ZNF236Q9UL36 1845 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 LGR5O75473 907 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 IPO7O95373 1038 aaKnown RBP18.25■□□□□ 0.51
CTSA-207ENST00000484855 TRIM49P0CI25 452 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 TRIM49CP0CI26 452 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 ACTN1P12814 892 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 FMO5P49326 533 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 KRT83P78385 493 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 SFMBT2Q5VUG0 894 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 INTS8Q75QN2 995 aaKnown RBP18.25■□□□□ 0.51
CTSA-207ENST00000484855 ARHGAP20Q9P2F6 1191 aa18.25■□□□□ 0.51
CTSA-207ENST00000484855 EIF3CLB5ME19 914 aaKnown RBP18.24■□□□□ 0.51
CTSA-207ENST00000484855 PLEKP08567 350 aaPredicted RBP18.24■□□□□ 0.51
CTSA-207ENST00000484855 ABCD1P33897 745 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 TARBP2Q15633 366 aaKnown RBP18.24■□□□□ 0.51
CTSA-207ENST00000484855 TRIM50Q86XT4 487 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 SYN2Q92777 582 aaPredicted RBP18.24■□□□□ 0.51
CTSA-207ENST00000484855 EIF3CQ99613 913 aaKnown RBP18.24■□□□□ 0.51
CTSA-207ENST00000484855 VTA1Q9NP79 307 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 ARHGAP28Q9P2N2 729 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 DIS3Q9Y2L1 958 aaKnown RBP18.24■□□□□ 0.51
CTSA-207ENST00000484855 EMSYQ7Z589 1322 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 ANKRD63C9JTQ0 380 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 MARK3P27448 753 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 RAPGEF1Q13905 1077 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 GRB14Q14449 540 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 KLHDC7AQ5VTJ3 777 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 DPY19L2P1Q6NXN4 242 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 ZNF467Q7Z7K2 595 aaPredicted RBP18.24■□□□□ 0.51
CTSA-207ENST00000484855 RASAL3Q86YV0 1011 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 GPIHBP1Q8IV16 184 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 ASAP3Q8TDY4 903 aa18.24■□□□□ 0.51
CTSA-207ENST00000484855 BBXQ8WY36 941 aaPredicted RBP18.24■□□□□ 0.51
CTSA-207ENST00000484855 DEF6Q9H4E7 631 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms