RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 PIK3R6Q5UE93 754 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 WDR92Q96MX6 357 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 TUBGCP5Q96RT8 1024 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 ELF4Q99607 663 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-207ENST00000484275 POLR3BQ9NW08 1133 aaPredicted RBP6.63□□□□□ -1.35
SCAF11-207ENST00000484275 GPRC5BQ9NZH0 403 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 B4GALT6Q9UBX8 382 aa6.63□□□□□ -1.35
SCAF11-207ENST00000484275 REXO2Q9Y3B8 237 aaKnown RBP6.63□□□□□ -1.35
SCAF11-207ENST00000484275 A0A087X1B8 175 aa6.62□□□□□ -1.35
SCAF11-207ENST00000484275 GOLGA8BA8MQT2 603 aa6.62□□□□□ -1.35
SCAF11-207ENST00000484275 H7C1D1 291 aa6.62□□□□□ -1.35
SCAF11-207ENST00000484275 VSIG10L2P0DP72 767 aa6.62□□□□□ -1.35
SCAF11-207ENST00000484275 BMS1Q14692 1282 aaKnown RBP6.62□□□□□ -1.35
SCAF11-207ENST00000484275 ELAVL1Q15717 326 aaKnown RBP6.62□□□□□ -1.35
SCAF11-207ENST00000484275 SMN1Q16637 294 aaKnown RBP6.62□□□□□ -1.35
SCAF11-207ENST00000484275 GAGE13Q4V321 117 aa6.62□□□□□ -1.35
SCAF11-207ENST00000484275 UNQ6494/PRO21346Q6UXR6 183 aa6.62□□□□□ -1.35
SCAF11-207ENST00000484275 KANSL1Q7Z3B3 1105 aa6.62□□□□□ -1.35
SCAF11-207ENST00000484275 BMP8AQ7Z5Y6 402 aa6.62□□□□□ -1.35
SCAF11-207ENST00000484275 KLRG2A4D1S0 409 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-207ENST00000484275 RABGGTBP53611 331 aa6.61□□□□□ -1.35
SCAF11-207ENST00000484275 INHBEP58166 350 aa6.61□□□□□ -1.35
SCAF11-207ENST00000484275 PURAQ00577 322 aaKnown RBP6.61□□□□□ -1.35
SCAF11-207ENST00000484275 SF3A1Q15459 793 aaKnown RBP6.61□□□□□ -1.35
SCAF11-207ENST00000484275 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
SCAF11-207ENST00000484275 C1QL3Q5VWW1 255 aa6.61□□□□□ -1.35
SCAF11-207ENST00000484275 CDCA2Q69YH5 1023 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-207ENST00000484275 ELOA2Q8IYF1 753 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-207ENST00000484275 TCF25Q9BQ70 676 aa6.61□□□□□ -1.35
SCAF11-207ENST00000484275 PITHD1Q9GZP4 211 aaPredicted RBP6.61□□□□□ -1.35
SCAF11-207ENST00000484275 CABP5Q9NP86 173 aa6.61□□□□□ -1.35
SCAF11-207ENST00000484275 A0A0A6YYK5 440 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-207ENST00000484275 PEX11BO96011 259 aa6.6□□□□□ -1.35
SCAF11-207ENST00000484275 JMJD7P0C870 316 aa6.6□□□□□ -1.35
SCAF11-207ENST00000484275 MAN2A2P49641 1150 aa6.6□□□□□ -1.35
SCAF11-207ENST00000484275 CNGB1Q14028 1251 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-207ENST00000484275 ZNF174Q15697 407 aa6.6□□□□□ -1.35
SCAF11-207ENST00000484275 FKBP15Q5T1M5 1219 aa6.6□□□□□ -1.35
SCAF11-207ENST00000484275 AGAP2Q99490 1192 aa6.6□□□□□ -1.35
SCAF11-207ENST00000484275 SOX7Q9BT81 388 aa6.6□□□□□ -1.35
SCAF11-207ENST00000484275 GPR87Q9BY21 358 aa6.6□□□□□ -1.35
SCAF11-207ENST00000484275 H2AFY2Q9P0M6 372 aaPredicted RBP6.6□□□□□ -1.35
SCAF11-207ENST00000484275 XDHP47989 1333 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 A0A0A6YYJ9 748 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 RPS6KA4O75676 772 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 STC2O76061 302 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 RANGAP1P46060 587 aaPredicted RBP6.59□□□□□ -1.35
SCAF11-207ENST00000484275 BCAR1P56945 870 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 ADCY2Q08462 1091 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 NME9Q86XW9 330 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 GSPT2Q8IYD1 628 aaKnown RBP6.59□□□□□ -1.35
SCAF11-207ENST00000484275 ULK2Q8IYT8 1036 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 SH3TC2Q8TF17 1288 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 RTF1Q92541 710 aaKnown RBP6.59□□□□□ -1.35
SCAF11-207ENST00000484275 MYL10Q9BUA6 226 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 POFUT1Q9H488 388 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 MTG2Q9H4K7 406 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 OXSMQ9NWU1 459 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 SPO11Q9Y5K1 396 aa6.59□□□□□ -1.35
SCAF11-207ENST00000484275 FAM83GA6ND36 823 aa6.58□□□□□ -1.36
SCAF11-207ENST00000484275 FAM20BO75063 409 aa6.58□□□□□ -1.36
SCAF11-207ENST00000484275 PRPF6O94906 941 aaKnown RBP6.58□□□□□ -1.36
SCAF11-207ENST00000484275 JUNP05412 331 aaKnown RBP6.58□□□□□ -1.36
SCAF11-207ENST00000484275 KRT40Q6A162 431 aa6.58□□□□□ -1.36
SCAF11-207ENST00000484275 HTR3DQ70Z44 454 aa6.58□□□□□ -1.36
SCAF11-207ENST00000484275 MRGPRGQ86SM5 289 aa6.58□□□□□ -1.36
SCAF11-207ENST00000484275 RPGRQ92834 1020 aaKnown RBP6.58□□□□□ -1.36
SCAF11-207ENST00000484275 PGBD4Q96DM1 585 aa6.58□□□□□ -1.36
SCAF11-207ENST00000484275 ZNF512Q96ME7 567 aaPredicted RBP6.58□□□□□ -1.36
SCAF11-207ENST00000484275 ZMAT4Q9H898 229 aa6.58□□□□□ -1.36
SCAF11-207ENST00000484275 RCAN3Q9UKA8 241 aa6.58□□□□□ -1.36
SCAF11-207ENST00000484275 DMRT1Q9Y5R6 373 aa6.58□□□□□ -1.36
SCAF11-207ENST00000484275 GRXCR1A8MXD5 290 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 OPHN1O60890 802 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 APOL3O95236 402 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 ATP2A2P16615 1042 aaKnown RBP6.57□□□□□ -1.36
SCAF11-207ENST00000484275 KIR2DL3P43628 341 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 COL10A1Q03692 680 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 PABPC4Q13310 644 aaKnown RBP eCLIP6.57□□□□□ -1.36
SCAF11-207ENST00000484275 CFAP100Q494V2 611 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 RPUSD2Q8IZ73 545 aaKnown RBP6.57□□□□□ -1.36
SCAF11-207ENST00000484275 MB21D1Q8N884 522 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 MNTQ99583 582 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 C14orf93Q9H972 538 aaKnown RBP6.57□□□□□ -1.36
SCAF11-207ENST00000484275 NCDNQ9UBB6 729 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 TRPS1Q9UHF7 1281 aa6.57□□□□□ -1.36
SCAF11-207ENST00000484275 RFPL3O75679 317 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 ASMTLO95671 621 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 ADCY1Q08828 1119 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 NFE2L2Q16236 605 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 KIAA1841Q6NSI8 718 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 UBE2R2Q712K3 238 aaPredicted RBP6.56□□□□□ -1.36
SCAF11-207ENST00000484275 MRGPREQ86SM8 312 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 PHYKPLQ8IUZ5 450 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 CMTM4Q8IZR5 234 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 C7orf31Q8N865 590 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 ATXN2LQ8WWM7 1075 aaKnown RBP6.56□□□□□ -1.36
SCAF11-207ENST00000484275 NRDE2Q9H7Z3 1164 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 TOMM22Q9NS69 142 aa6.56□□□□□ -1.36
SCAF11-207ENST00000484275 TMEM260Q9NX78 707 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms