RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ABI1Q8IZP0 508 aa14.59□□□□□ -0.07
UBR4-213ENST00000483922 RBM28Q9NW13 759 aaKnown RBP14.59□□□□□ -0.07
UBR4-213ENST00000483922 DNAJB4Q9UDY4 337 aa14.59□□□□□ -0.07
UBR4-213ENST00000483922 CACNA1AO00555 2505 aa14.58□□□□□ -0.07
UBR4-213ENST00000483922 LILRB3O75022 631 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 N4BP1O75113 896 aaKnown RBP14.58□□□□□ -0.08
UBR4-213ENST00000483922 GALTP07902 379 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 CTSAP10619 480 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 CIITAP33076 1130 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 AFF1P51825 1210 aaKnown RBP14.58□□□□□ -0.08
UBR4-213ENST00000483922 PFKFB3Q16875 520 aaPredicted RBP14.58□□□□□ -0.08
UBR4-213ENST00000483922 PRR16Q569H4 304 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 ATAT1Q5SQI0 421 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 DDX53Q86TM3 631 aaKnown RBP14.58□□□□□ -0.08
UBR4-213ENST00000483922 ZNF280BQ86YH2 543 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 IGSF21Q96ID5 467 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 SH2D3AQ9BRG2 576 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 ZMYND12Q9H0C1 365 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 USTQ9Y2C2 406 aa14.58□□□□□ -0.08
UBR4-213ENST00000483922 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.57□□□□□ -0.08
UBR4-213ENST00000483922 MSH4O15457 936 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 ZBTB43O43298 467 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 OFD1O75665 1012 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 OATP04181 439 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 PHKA2P46019 1235 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 ALDH7A1P49419 539 aaKnown RBP14.57□□□□□ -0.08
UBR4-213ENST00000483922 FOXK2Q01167 660 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 POTEGQ6S5H5 508 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 GPR149Q86SP6 731 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 ADSSL1Q8N142 457 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 TDRD5Q8NAT2 981 aaKnown RBP14.57□□□□□ -0.08
UBR4-213ENST00000483922 FLCNQ8NFG4 579 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 CYP26B1Q9NR63 512 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 TBC1D13Q9NVG8 400 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 DBR1Q9UK59 544 aaKnown RBP14.57□□□□□ -0.08
UBR4-213ENST00000483922 CEP131Q9UPN4 1083 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 DENND4AQ7Z401 1863 aa14.57□□□□□ -0.08
UBR4-213ENST00000483922 WDR81Q562E7 1941 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 MYH9P35579 1960 aaKnown RBP14.56□□□□□ -0.08
UBR4-213ENST00000483922 A0A087WZ62 844 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 IGKV6-21A0A0C4DH24 114 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 hCG_1984214I3L0E3 225 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 NARSO43776 548 aaKnown RBP14.56□□□□□ -0.08
UBR4-213ENST00000483922 ZC3H11AO75152 810 aaKnown RBP eCLIP14.56□□□□□ -0.083e-13■■□□□ 14.2
UBR4-213ENST00000483922 DDHD2O94830 711 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 AOC1P19801 751 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 CA8P35219 290 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 SLC11A1P49279 550 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 PRKCEQ02156 737 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 PTPN14Q15678 1187 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 SYNE3Q6ZMZ3 975 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 DHX32Q7L7V1 743 aaKnown RBP14.56□□□□□ -0.08
UBR4-213ENST00000483922 SKAP1Q86WV1 359 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 KSR1Q8IVT5 923 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 CCDC105Q8IYK2 499 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 PLCD3Q8N3E9 789 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 ZNF713Q8N859 430 aaPredicted RBP14.56□□□□□ -0.08
UBR4-213ENST00000483922 NKD2Q969F2 451 aaPredicted RBP14.56□□□□□ -0.08
UBR4-213ENST00000483922 TMEM169Q96HH4 297 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 KLHL5Q96PQ7 755 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 MAP7D2Q96T17 732 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 FDXACB1Q9BRP7 624 aaPredicted RBP14.56□□□□□ -0.08
UBR4-213ENST00000483922 TRAIPQ9BWF2 469 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 UNC45AQ9H3U1 944 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 KCNK12Q9HB15 430 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 DISC1Q9NRI5 854 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 NRBP2Q9NSY0 501 aa14.56□□□□□ -0.08
UBR4-213ENST00000483922 KLF18A0A0U1RQI7 1052 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 ESYT2A0FGR8 921 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 GOLGA8AA7E2F4 631 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 GOLGA8BA8MQT2 603 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 CNPP09543 421 aaKnown RBP14.55□□□□□ -0.08
UBR4-213ENST00000483922 CPA1P15085 419 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 TMOD1P28289 359 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 CLCN4P51793 760 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 POLGP54098 1239 aaPredicted RBP14.55□□□□□ -0.08
UBR4-213ENST00000483922 TDGQ13569 410 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 B3GNT9Q6UX72 402 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 AGMOQ6ZNB7 445 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 TAS1R1Q7RTX1 841 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 NLRP7Q8WX94 980 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 RSAD2Q8WXG1 361 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 NIFKQ9BYG3 293 aaKnown RBP14.55□□□□□ -0.08
UBR4-213ENST00000483922 GLT8D2Q9H1C3 349 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 ANO2Q9NQ90 1003 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 CHST12Q9NRB3 414 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 DZANK1Q9NVP4 752 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 SAMM50Q9Y512 469 aa14.55□□□□□ -0.08
UBR4-213ENST00000483922 KRBA1A5PL33 1030 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 WDR64B1ANS9 1081 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 ZNF623O75123 536 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 ID4P47928 161 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
UBR4-213ENST00000483922 ANGPT1Q15389 498 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 TSGA10IPQ3SY00 556 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 NOMO2Q5JPE7 1267 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 MCTP2Q6DN12 878 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 CABP7Q86V35 215 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 DTWD2Q8NBA8 298 aa14.54□□□□□ -0.08
UBR4-213ENST00000483922 SLC5A5Q92911 643 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms