RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CRB1P82279 1406 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 GNAT3A8MTJ3 354 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 MATN2O00339 956 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 KCNA2P16389 499 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 EIF3BP55884 814 aaKnown RBP8.41□□□□□ -1.06
COL4A5-205ENST00000483338 NAA20P61599 178 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 ZNF507Q8TCN5 953 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 DTX3LQ8TDB6 740 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 CCDC8Q9H0W5 538 aaPredicted RBP8.41□□□□□ -1.06
COL4A5-205ENST00000483338 IRF2BPLQ9H1B7 796 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 TMEM59LQ9UK28 342 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 DOLKQ9UPQ8 538 aa8.41□□□□□ -1.06
COL4A5-205ENST00000483338 PA2G4Q9UQ80 394 aaKnown RBP8.41□□□□□ -1.06
COL4A5-205ENST00000483338 FAM208AQ9UK61 1670 aaKnown RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 TLDC2A0PJX2 215 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 GRID2IPA4D2P6 1211 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 IQCA1LA6NCM1 817 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 DAPK3O43293 454 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 BUB1O43683 1085 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 ADCY3O60266 1144 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 CYP2C9P11712 490 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 TKTP29401 623 aaKnown RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 TNNC1P63316 161 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 SPAG1Q07617 926 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 ITGA9Q13797 1035 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 KCTD21Q4G0X4 260 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 ACSBG2Q5FVE4 666 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 TOM1L2Q6ZVM7 507 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 C11orf74Q86VG3 221 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 USP38Q8NB14 1042 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 EAF2Q96CJ1 260 aaPredicted RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 MAK16Q9BXY0 300 aaKnown RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 EPB41L1Q9H4G0 881 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 SELENONQ9NZV5 590 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 VPS54Q9P1Q0 977 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 RPL26L1Q9UNX3 145 aaKnown RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 SSX2IPQ9Y2D8 614 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 GPC6Q9Y625 555 aaPredicted RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 ZNF609O15014 1411 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 A0A1W2PQC6 194 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 RASA4BC9J798 803 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 RASA4O43374 803 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 ATP5HO75947 161 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 FGFR1OPO95684 399 aaKnown RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 KLK7P49862 253 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 ADRM1Q16186 407 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 VSIG1Q86XK7 387 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 IRF2BP1Q8IU81 584 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 STARD8Q92502 1023 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 ERP27Q96DN0 273 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 SPATA17Q96L03 361 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 KLHL14Q9P2G3 628 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 FBXO2Q9UK22 296 aaPredicted RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 STX8Q9UNK0 236 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.06
COL4A5-205ENST00000483338 HBS1LQ9Y450 684 aaKnown RBP8.4□□□□□ -1.06
COL4A5-205ENST00000483338 UMODL1Q5DID0 1318 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 SPATA31A3Q5VYP0 1347 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 TRIM64CA6NLI5 447 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 TTLL13PA6NNM8 815 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 LGALS16A8MUM7 142 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 FBXO21O94952 628 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 ZFYP08048 801 aaPredicted RBP8.4□□□□□ -1.07
COL4A5-205ENST00000483338 ACADVLP49748 655 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 MAP3K10Q02779 954 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 SPIDRQ14159 915 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 SEPT7Q16181 437 aaKnown RBP8.4□□□□□ -1.07
COL4A5-205ENST00000483338 GPR162Q16538 588 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 VASH1Q7L8A9 365 aaPredicted RBP8.4□□□□□ -1.07
COL4A5-205ENST00000483338 OTUD6AQ7L8S5 288 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 MGARPQ8TDB4 240 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 C8orf37Q96NL8 207 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 STRCQ7RTU9 1775 aa8.4□□□□□ -1.07
COL4A5-205ENST00000483338 PXDNLA1KZ92 1463 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 A0A087X0B3 334 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 ZNF862O60290 1169 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 OPHN1O60890 802 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 MARK3P27448 753 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 PCSK6P29122 969 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 PPIDQ08752 370 aaKnown RBP8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CTC1Q2NKJ3 1217 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 KLHDC10Q6PID8 442 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 ARHGAP24Q8N264 748 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 NSMCE3Q96MG7 304 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 GPR101Q96P66 508 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-205ENST00000483338 HGH1Q9BTY7 390 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 TXLNGYQ9BZA5 131 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CEP44Q9C0F1 390 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 TCP11L1Q9NUJ3 509 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CTDP1Q9Y5B0 961 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-205ENST00000483338 E7EWF7 191 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 RGS16O15492 202 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-205ENST00000483338 TTI1O43156 1089 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CBFA2T3O75081 653 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 PSMG1O95456 288 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 FTCDO95954 541 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 PTPREP23469 700 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CTDSPL2Q05D32 466 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms