RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 ZNF831Q5JPB2 1677 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 NHSQ6T4R5 1651 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 PITPNM2Q9BZ72 1349 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 BHMG1C9JSJ3 638 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 PGRMC1O00264 195 aaKnown RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 XRCC5P13010 732 aaKnown RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 SHMT1P34896 483 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 CASP4P49662 377 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 SPIRE1Q08AE8 756 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 LRIG3Q6UXM1 1119 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 CCT6BQ92526 530 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 P2RX7Q99572 595 aaKnown RBP13.43□□□□□ -0.26
CCDC78-213ENST00000482878 SERPINB13Q9UIV8 391 aa13.43□□□□□ -0.26
CCDC78-213ENST00000482878 SMIM23A6NLE4 172 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 KRIT1O00522 736 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 PCK1P35558 622 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 SLMAPQ14BN4 828 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 EPHA7Q15375 998 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 GPATCH4Q5T3I0 446 aaKnown RBP13.42□□□□□ -0.26
CCDC78-213ENST00000482878 TCERG1LQ5VWI1 586 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 PEX26Q7Z412 305 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-213ENST00000482878 EIF1ADQ8N9N8 165 aaKnown RBP13.42□□□□□ -0.26
CCDC78-213ENST00000482878 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 KDM4CQ9H3R0 1056 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 SIX2Q9NPC8 291 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 SAMD15Q9P1V8 674 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 CORO1CQ9ULV4 474 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-213ENST00000482878 NENFQ9UMX5 172 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-213ENST00000482878 RSPH10B2B2RC85 870 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 RSPH10BP0C881 870 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 PRKCIP41743 596 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 KCNA1Q09470 495 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 IFI16Q16666 785 aaKnown RBP13.42□□□□□ -0.26
CCDC78-213ENST00000482878 QRICH1Q2TAL8 776 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 LACTB2Q53H82 288 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-213ENST00000482878 ZC3H12AQ5D1E8 599 aaKnown RBP13.42□□□□□ -0.26
CCDC78-213ENST00000482878 EPM2AIP1Q7L775 607 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-213ENST00000482878 ARMC9Q7Z3E5 817 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 TBC1D16Q8TBP0 767 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 FAM210AQ96ND0 272 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 FBXL5Q9UKA1 691 aa13.42□□□□□ -0.26
CCDC78-213ENST00000482878 DAPK3O43293 454 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 FLOT1O75955 427 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 PDHA1P08559 390 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 SPATA31C1P0DKV0 1188 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 SPICE1Q8N0Z3 855 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 P3H4Q92791 437 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 RBM17Q96I25 401 aaKnown RBP13.41□□□□□ -0.26
CCDC78-213ENST00000482878 ELAC2Q9BQ52 826 aaKnown RBP13.41□□□□□ -0.26
CCDC78-213ENST00000482878 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 STXBP5LQ9Y2K9 1186 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 PCDHA1Q9Y5I3 950 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 LRRD1A4D1F6 860 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 DDX3XO00571 662 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCDC78-213ENST00000482878 CYP3A7P24462 503 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 PRR16Q569H4 304 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 SLFN11Q7Z7L1 901 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 KIF2BQ8N4N8 673 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 LRRC45Q96CN5 670 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 CHMP6Q96FZ7 201 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 CELF4Q9BZC1 486 aaKnown RBP13.41□□□□□ -0.26
CCDC78-213ENST00000482878 USP40Q9NVE5 1235 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 CNOT8Q9UFF9 292 aaKnown RBP13.41□□□□□ -0.26
CCDC78-213ENST00000482878 SLC12A6Q9UHW9 1150 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 TLDC2A0PJX2 215 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 TTI1O43156 1089 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 LUC7L3O95232 432 aaKnown RBP13.41□□□□□ -0.26
CCDC78-213ENST00000482878 JAM2P57087 298 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 TAX1BP1Q86VP1 789 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 B4GALNT2Q8NHY0 566 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 ETNPPLQ8TBG4 499 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 SLC35C1Q96A29 364 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 CCDC113Q9H0I3 377 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 IKZF4Q9H2S9 585 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 LRRC4CQ9HCJ2 640 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCDC78-213ENST00000482878 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
CCDC78-213ENST00000482878 CLIC2O15247 247 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 AHCYL1O43865 530 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 H2AFZP0C0S5 128 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 SHROOM1Q2M3G4 852 aaPredicted RBP13.4□□□□□ -0.26
CCDC78-213ENST00000482878 CRELD2Q6UXH1 353 aaPredicted RBP13.4□□□□□ -0.26
CCDC78-213ENST00000482878 H2AFVQ71UI9 128 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 DAAM2Q86T65 1068 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 NT5DC3Q86UY8 548 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 RASGEF1CQ8N431 466 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 SYT2Q8N9I0 419 aaPredicted RBP13.4□□□□□ -0.26
CCDC78-213ENST00000482878 U2AF1L4Q8WU68 220 aaKnown RBP13.4□□□□□ -0.26
CCDC78-213ENST00000482878 MBOAT7Q96N66 472 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 NAP1L4Q99733 375 aaKnown RBP13.4□□□□□ -0.26
CCDC78-213ENST00000482878 GCNT4Q9P109 453 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 ASTN1O14525 1302 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 PDXKO00764 312 aa13.4□□□□□ -0.26
CCDC78-213ENST00000482878 MEIS2O14770 477 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms