RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 SPDYE4A6NLX3 237 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 NT5C1B-RDH14C9J2C7 533 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 BACH1O14867 736 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 SPTLC1O15269 473 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 RPS6KA5O75582 802 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 ATG7O95352 703 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 CXCL14O95715 111 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 FOSP01100 380 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 TGM1P22735 817 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 SREBF1P36956 1147 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 SLC26A2P50443 739 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 METAP2P50579 478 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 ADCY7P51828 1080 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 DMWDQ09019 674 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 RTN1Q16799 776 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 MTHFD1LQ6UB35 978 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 ABHD15Q6UXT9 468 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 SYNE3Q6ZMZ3 975 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 GPR149Q86SP6 731 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 CCDC60Q8IWA6 550 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 FANCMQ8IYD8 2048 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 KIAA0319LQ8IZA0 1049 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 SLC39A11Q8N1S5 342 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 PIAS4Q8N2W9 510 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 LRRC43Q8N309 656 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 NME8Q8N427 588 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 GPR161Q8N6U8 529 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 ST13P5Q8NFI4 369 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 TNPO1Q92973 898 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 TCEANC2Q96MN5 208 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 PPP1R16BQ96T49 567 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 TMEM117Q9H0C3 514 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 ARHGEF3Q9NR81 526 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 RBM28Q9NW13 759 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 TMEM161AQ9NX61 479 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 IGSF9Q9P2J2 1179 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 BRPF3Q9ULD4 1205 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 ST3GAL5Q9UNP4 418 aa10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 V9GY48 417 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-210ENST00000481231 FASNP49327 2511 aaKnown RBP10.71□□□□□ -0.7
SMARCE1-210ENST00000481231 COL4A3Q01955 1670 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 IGKV6D-21A0A0A0MT36 114 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 ZBTB42B2RXF5 422 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 DDX39AO00148 427 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 ZBTB43O43298 467 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 HBP1O60381 514 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 KLRC1P26715 233 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 GBP2P32456 591 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 LETM2Q2VYF4 491 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 PHLDB3Q6NSJ2 640 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 TMEM173Q86WV6 379 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 VPS52Q8N1B4 723 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 SLC44A3Q8N4M1 653 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 TMEM87AQ8NBN3 555 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 PJA1Q8NG27 643 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 SLC22A17Q8WUG5 538 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 ZBP1Q9H171 429 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 SFXN1Q9H9B4 322 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 BARHL2Q9NY43 387 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 ZFYVE26Q68DK2 2539 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 LOXHD1Q8IVV2 1947 aa10.7□□□□□ -0.7
SMARCE1-210ENST00000481231 SMCO2A6NFE2 343 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 FAM86B1E9PN63 330 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 DHX15O43143 795 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 FAM86B2P0C5J1 330 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 SRFP11831 508 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 ZNF76P36508 570 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 CLK2P49760 499 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 EXOSC10Q01780 885 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 CSTF1Q05048 431 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 AP3B2Q13367 1082 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 CLLU1OSQ5K130 101 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 RNF20Q5VTR2 975 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 FAM160B1Q5W0V3 765 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 NIPA1Q7RTP0 329 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 PLA2G4DQ86XP0 818 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 RNF169Q8NCN4 708 aa10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 SECISBP2LQ93073 1101 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 FAM217BQ9NTX9 383 aaPredicted RBP10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 SPATA6Q9NWH7 488 aaPredicted RBP10.69□□□□□ -0.7
SMARCE1-210ENST00000481231 COL1A2P08123 1366 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 IGLV3-22A0A075B6J6 115 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 KLF18A0A0U1RQI7 1052 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 GOLGA8AA7E2F4 631 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 GOLGA8BA8MQT2 603 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 hCG_1984214I3L0E3 225 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 IPO5O00410 1097 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ZZEF1O43149 2961 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 LAMTOR5O43504 91 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 C22orf31O95567 290 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ATP4AP20648 1035 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 CDC27P30260 824 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 FAM189BP81408 668 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 PTPN14Q15678 1187 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 LPAL2Q16609 132 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 KIZQ2M2Z5 673 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ZNF528Q3MIS6 628 aa10.68□□□□□ -0.7
SMARCE1-210ENST00000481231 ZNF484Q5JVG2 852 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms