RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 MARCH10Q8NA82 808 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-220ENST00000480064 FAM168AQ92567 244 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 WNT8AQ9H1J5 351 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 AGO4Q9HCK5 861 aaKnown RBP7.44□□□□□ -1.22
PBRM1-220ENST00000480064 SAGE1Q9NXZ1 904 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 PGAP2Q9UHJ9 254 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 CDC23Q9UJX2 597 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 MAGED2Q9UNF1 606 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-220ENST00000480064 CAPN6Q9Y6Q1 641 aa7.44□□□□□ -1.22
PBRM1-220ENST00000480064 DYTNA2CJ06 578 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 IGF2BP3O00425 579 aaKnown RBP eCLIP7.43□□□□□ -1.22
PBRM1-220ENST00000480064 MAFKO60675 156 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 RNASEH2AO75792 299 aaKnown RBP7.43□□□□□ -1.22
PBRM1-220ENST00000480064 GJA4P35212 333 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 MAPK10P53779 464 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 CCDC38Q502W7 563 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 ZNF648Q5T619 568 aaPredicted RBP7.43□□□□□ -1.22
PBRM1-220ENST00000480064 TIGD7Q6NT04 549 aaPredicted RBP7.43□□□□□ -1.22
PBRM1-220ENST00000480064 RSRC2Q7L4I2 434 aaKnown RBP7.43□□□□□ -1.22
PBRM1-220ENST00000480064 GPR155Q7Z3F1 870 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 ANKRD18AQ8IVF6 992 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 GPATCH11Q8N954 259 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 CCDC89Q8N998 374 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 ZNF496Q96IT1 587 aaPredicted RBP7.43□□□□□ -1.22
PBRM1-220ENST00000480064 MAML3Q96JK9 1138 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 CGRRF1Q99675 332 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 ACE2Q9BYF1 805 aaPredicted RBP7.43□□□□□ -1.22
PBRM1-220ENST00000480064 LRRC27Q9C0I9 530 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 BTBD1Q9H0C5 482 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 RRN3Q9NYV6 651 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 PADI4Q9UM07 663 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 STXBP5LQ9Y2K9 1186 aa7.43□□□□□ -1.22
PBRM1-220ENST00000480064 PRAMEF25A6NGN4 478 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 FOXN3O00409 490 aaPredicted RBP7.42□□□□□ -1.22
PBRM1-220ENST00000480064 NKRFO15226 690 aaKnown RBP eCLIP7.42□□□□□ -1.22
PBRM1-220ENST00000480064 APOL3O95236 402 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 LPLP06858 475 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 TECP42680 631 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 SPIDRQ14159 915 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 STARD3Q14849 445 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 MUM1Q2TAK8 710 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 HSF5Q4G112 596 aaPredicted RBP7.42□□□□□ -1.22
PBRM1-220ENST00000480064 IZUMO3Q5VZ72 239 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 MZT2AQ6P582 158 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 SLC23A3Q6PIS1 610 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 RNF111Q6ZNA4 994 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 KCNK18Q7Z418 384 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 TSPYL5Q86VY4 417 aaPredicted RBP7.42□□□□□ -1.22
PBRM1-220ENST00000480064 PRR18Q8N4B5 295 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 NAXEQ8NCW5 288 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 PIP4K2CQ8TBX8 421 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 DLG3Q92796 817 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 KIAA1191Q96A73 305 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 CD244Q9BZW8 370 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 IFT122Q9HBG6 1241 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 STARD7Q9NQZ5 370 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 PDLIM7Q9NR12 457 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 NRBP1Q9UHY1 535 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 CNTNAP4Q9C0A0 1308 aa7.42□□□□□ -1.22
PBRM1-220ENST00000480064 TCRBV5S4A2TA0A5A2 114 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 UBA6A0AVT1 1052 aaPredicted RBP7.41□□□□□ -1.22
PBRM1-220ENST00000480064 PRR33A8MZF0 331 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 FARP2O94887 1054 aaPredicted RBP7.41□□□□□ -1.22
PBRM1-220ENST00000480064 ALDH2P05091 517 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 PIK3CBP42338 1070 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 AGFG1P52594 562 aaKnown RBP7.41□□□□□ -1.22
PBRM1-220ENST00000480064 DUSP4Q13115 394 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 PPFIA1Q13136 1202 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 PDE1CQ14123 709 aaPredicted RBP7.41□□□□□ -1.22
PBRM1-220ENST00000480064 PGBD2Q6P3X8 592 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 LVRNQ6Q4G3 990 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 MIGA2Q7L4E1 593 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 MAEAQ7L5Y9 396 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 DRC7Q8IY82 874 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 ASB11Q8WXH4 323 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 C16orf92Q96LL3 132 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 NEUROD6Q96NK8 337 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 EIF2AK1Q9BQI3 630 aaKnown RBP7.41□□□□□ -1.22
PBRM1-220ENST00000480064 KCTD10Q9H3F6 313 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 POFUT1Q9H488 388 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 RIC8BQ9NVN3 520 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 DPP7Q9UHL4 492 aa7.41□□□□□ -1.22
PBRM1-220ENST00000480064 LRRFIP2Q9Y608 721 aaKnown RBP7.41□□□□□ -1.22
PBRM1-220ENST00000480064 CCDC154A6NI56 674 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 C22orf46C9J442 243 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 CCER2I3L3R5 266 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 FOXP2O15409 715 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 RHOBTB3O94955 611 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 RPLP2P05387 115 aaKnown RBP7.4□□□□□ -1.22
PBRM1-220ENST00000480064 SRFP11831 508 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 RPL17P18621 184 aaKnown RBP7.4□□□□□ -1.22
PBRM1-220ENST00000480064 TNFAIP3P21580 790 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 IL6STP40189 918 aaPredicted RBP7.4□□□□□ -1.22
PBRM1-220ENST00000480064 STT3AP46977 705 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 CASP5P51878 434 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 CHRNA2Q15822 529 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 PITRM1Q5JRX3 1037 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 HABP4Q5JVS0 413 aaKnown RBP7.4□□□□□ -1.22
PBRM1-220ENST00000480064 THEMIS2Q5TEJ8 643 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms