RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	FAM205C	A6NFA0	338 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CSDE1	O75534	798 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CSPG5	O95196	566 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ITGB1	P05556	798 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	SRGAP2C	P0DJJ0	459 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	FGFR1	P11362	822 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ATP2B1	P20020	1258 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	RBM25	P49756	843 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	GUCY1B3	Q02153	619 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CYP4A11	Q02928	519 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	KRT17	Q04695	432 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	NCBP1	Q09161	790 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	DRP2	Q13474	957 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CTTN	Q14247	550 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TWF2	Q6IBS0	349 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PDE12	Q6L8Q7	609 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CATSPER4	Q7RTX7	472 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	POF1B	Q8WVV4	589 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PRPF31	Q8WWY3	499 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	NECAB3	Q96P71	396 aa	Predicted RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CEP89	Q96ST8	783 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	KIF3A	Q9Y496	699 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	COL4A3BP	Q9Y5P4	624 aa		13.76	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	FSD2	A1L4K1	749 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CARNS1	A5YM72	827 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584		H3BQ06	376 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ST18	O60284	1047 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	FGF18	O76093	207 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	SLITRK3	O94933	977 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	FGFR4	P22455	802 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PPM1A	P35813	382 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	MXD4	Q14582	209 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	BMS1	Q14692	1282 aa	Known RBP	13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	LRRC43	Q8N309	656 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	COLGALT1	Q8NBJ5	622 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TMEM143	Q96AN5	459 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ZNF558	Q96NG5	402 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	MRPL9	Q9BYD2	267 aa	Known RBP	13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	FOXP1	Q9H334	677 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	DHX33	Q9H6R0	707 aa	Known RBP	13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ANKEF1	Q9NU02	776 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PIN4	Q9Y237	131 aa	Known RBP	13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	SI	P14410	1827 aa		13.75	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	GRXCR2	A6NFK2	248 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	MCM7	P33993	719 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ALDH7A1	P49419	539 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	RAB27A	P51159	221 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	SPIRE1	Q08AE8	756 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	LAMTOR4	Q0VGL1	99 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	HYAL1	Q12794	435 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ORC2	Q13416	577 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TFDP1	Q14186	410 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	COL19A1	Q14993	1142 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	EMC2	Q15006	297 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	GLB1L	Q6UWU2	654 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	SRGAP1	Q7Z6B7	1085 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	KSR1	Q8IVT5	923 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	FBXO18	Q8NFZ0	1043 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PGBD4	Q96DM1	585 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CASD1	Q96PB1	797 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	MTR	Q99707	1265 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	HSD17B14	Q9BPX1	270 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TRAIP	Q9BWF2	469 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TLE6	Q9H808	572 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TLR9	Q9NR96	1032 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	NOL7	Q9UMY1	257 aa	Known RBP	13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	NCOR1	O75376	2440 aa		13.74	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	EVPL	Q92817	2033 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	LYPLA2	O95372	231 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	XRCC6	P12956	609 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	6e-6	■■■■■ 27.6
CDK5RAP2-211	ENST00000479584	DNAJB1	P25685	340 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	SSTR3	P32745	418 aa	Predicted RBP	13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PHKA2	P46019	1235 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	NDUFV1	P49821	464 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	RABEP1	Q15276	862 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	C8orf34	Q49A92	452 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	KCNT2	Q6UVM3	1135 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ZNF579	Q8NAF0	562 aa	Known RBP	13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ERMN	Q8TAM6	284 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	MTMR9	Q96QG7	549 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	C1QTNF1	Q9BXJ1	281 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	SPG21	Q9NZD8	308 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	LZTS1	Q9Y250	596 aa		13.73	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	BDP1	A6H8Y1	2624 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	DGAT1	O75907	488 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ERLIN2	O94905	339 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	SRGAP2B	P0DMP2	458 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	NRIP1	P48552	1158 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TRAPPC10	P48553	1259 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PLCB3	Q01970	1234 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	RNASEL	Q05823	741 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ADAM15	Q13444	863 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CAMK1	Q14012	370 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CTC1	Q2NKJ3	1217 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms