RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 SUCLA2Q9P2R7 463 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-218ENST00000479554 A0A087WZ62 844 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 A0A0U1RQF3 1178 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 FAM205CA6NFA0 338 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 BAG4O95429 457 aaKnown RBP16.05■□□□□ 0.16
ATG4B-218ENST00000479554 SFPQP23246 707 aaKnown RBP eCLIP16.05■□□□□ 0.16
ATG4B-218ENST00000479554 NRIP1P48552 1158 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 ADAM15Q13444 863 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 EPHA7Q15375 998 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 NCAPH2Q6IBW4 605 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 SLFN12Q8IYM2 578 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 MICAL1Q8TDZ2 1067 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 SLC7A3Q8WY07 619 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 HAS1Q92839 578 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 CEP170P1Q96L14 293 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 NLRP4Q96MN2 994 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 FDXACB1Q9BRP7 624 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-218ENST00000479554 LXNQ9BS40 222 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 INO80BQ9C086 356 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-218ENST00000479554 PRKAG3Q9UGI9 489 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 PPME1Q9Y570 386 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 PCDHGC5Q9Y5F6 944 aa16.05■□□□□ 0.16
ATG4B-218ENST00000479554 MBTPS2O43462 519 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 EOMESO95936 686 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 PPM1AP35813 382 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 FOSBP53539 338 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 POLGP54098 1239 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-218ENST00000479554 NPEPPSP55786 919 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 ZP2Q05996 745 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 SMAD4Q13485 552 aaKnown RBP16.04■□□□□ 0.16
ATG4B-218ENST00000479554 TRIM29Q14134 588 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 RBM23Q86U06 439 aaKnown RBP16.04■□□□□ 0.16
ATG4B-218ENST00000479554 EXOC8Q8IYI6 725 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 EFHBQ8N7U6 833 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 TNFRSF25Q93038 417 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 ZNF558Q96NG5 402 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 TLE6Q9H808 572 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 CHST12Q9NRB3 414 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 WRAP73Q9P2S5 460 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-218ENST00000479554 CD207Q9UJ71 328 aa16.04■□□□□ 0.16
ATG4B-218ENST00000479554 PIN4Q9Y237 131 aaKnown RBP16.04■□□□□ 0.16
ATG4B-218ENST00000479554 JAK2O60674 1132 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 ATF7P17544 494 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-218ENST00000479554 RFC5P40937 340 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 SMAD2Q15796 467 aaKnown RBP16.03■□□□□ 0.16
ATG4B-218ENST00000479554 TMEM31Q5JXX7 168 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 CLLU1OSQ5K130 101 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
ATG4B-218ENST00000479554 PDE12Q6L8Q7 609 aaKnown RBP16.03■□□□□ 0.16
ATG4B-218ENST00000479554 KCNT2Q6UVM3 1135 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 LRRC55Q6ZSA7 311 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 CATSPER4Q7RTX7 472 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 ZNF598Q86UK7 904 aaKnown RBP16.03■□□□□ 0.16
ATG4B-218ENST00000479554 KSR1Q8IVT5 923 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 ADHFE1Q8IWW8 467 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 C4orf19Q8IY42 314 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 HELQQ8TDG4 1101 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 MRPS27Q92552 414 aaKnown RBP16.03■□□□□ 0.16
ATG4B-218ENST00000479554 DYDC2Q96IM9 177 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 MRPL9Q9BYD2 267 aaKnown RBP16.03■□□□□ 0.16
ATG4B-218ENST00000479554 PUF60Q9UHX1 559 aaKnown RBP16.03■□□□□ 0.16
ATG4B-218ENST00000479554 LZTS1Q9Y250 596 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 COL4A3BPQ9Y5P4 624 aa16.03■□□□□ 0.16
ATG4B-218ENST00000479554 FSD2A1L4K1 749 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 PI4K2BG5E9Z4 385 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 GAS2O43903 313 aaKnown RBP16.02■□□□□ 0.16
ATG4B-218ENST00000479554 YWHABP31946 246 aaKnown RBP16.02■□□□□ 0.16
ATG4B-218ENST00000479554 PBX3P40426 434 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 PHKA2P46019 1235 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 RBM25P49756 843 aaKnown RBP16.02■□□□□ 0.16
ATG4B-218ENST00000479554 PLCB3Q01970 1234 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 CYP4A11Q02928 519 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 SPIRE1Q08AE8 756 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 PLPP4Q5VZY2 271 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 DIS3L2Q8IYB7 885 aaKnown RBP16.02■□□□□ 0.16
ATG4B-218ENST00000479554 ZNF579Q8NAF0 562 aaKnown RBP16.02■□□□□ 0.16
ATG4B-218ENST00000479554 PSPC1Q8WXF1 523 aaKnown RBP16.02■□□□□ 0.16
ATG4B-218ENST00000479554 MSLNLQ96KJ4 702 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 LRFN3Q9BTN0 628 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 DHX33Q9H6R0 707 aaKnown RBP16.02■□□□□ 0.16
ATG4B-218ENST00000479554 ZSWIM4Q9H7M6 989 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 BMP2KQ9NSY1 1161 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-218ENST00000479554 RGL1Q9NZL6 768 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 RAPGEFL1Q9UHV5 662 aa16.02■□□□□ 0.16
ATG4B-218ENST00000479554 BARX2Q9UMQ3 279 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-218ENST00000479554 ARID2Q68CP9 1835 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 BTBD18B2RXH4 712 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 FSCN2O14926 492 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 NEMFO60524 1076 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 GLP2RO95838 553 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 SKIP12755 728 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 ERVFC1P60507 584 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 CTTNQ14247 550 aaKnown RBP16.01■□□□□ 0.15
ATG4B-218ENST00000479554 EMC2Q15006 297 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 CALCRLQ16602 461 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 DUSP6Q16828 381 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 XKR9Q5GH70 373 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 TCP11Q8WWU5 503 aa16.01■□□□□ 0.15
ATG4B-218ENST00000479554 RSPH1Q8WYR4 309 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms