RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 B4GALT4O60513 344 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 H2AFYO75367 372 aaKnown RBP7.39□□□□□ -1.23
CCDC58-204ENST00000479414 CNOT4O95628 575 aaKnown RBP7.39□□□□□ -1.23
CCDC58-204ENST00000479414 CELA3BP08861 270 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 HOXA5P20719 270 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 RRADP55042 308 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 SCAND1P57086 179 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 KLF1Q13351 362 aaPredicted RBP7.39□□□□□ -1.23
CCDC58-204ENST00000479414 TRIM25Q14258 630 aaKnown RBP7.39□□□□□ -1.23
CCDC58-204ENST00000479414 UGT8Q16880 541 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 INAVAQ3KP66 663 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 FBLN7Q53RD9 439 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 LPPQ93052 612 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 RAX2Q96IS3 184 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 KCTD10Q9H3F6 313 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 PRDM12Q9H4Q4 367 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 RTEL1Q9NZ71 1219 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 PRSS50Q9UI38 385 aa7.39□□□□□ -1.23
CCDC58-204ENST00000479414 CTDP1Q9Y5B0 961 aaPredicted RBP7.39□□□□□ -1.23
CCDC58-204ENST00000479414 SEC24DO94855 1032 aaPredicted RBP7.38□□□□□ -1.23
CCDC58-204ENST00000479414 GPR3P46089 330 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 EPHB4P54760 987 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 PPP2CBP62714 309 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 PPP2CAP67775 309 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 MAN2A1Q16706 1144 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC58-204ENST00000479414 ZNF568Q3ZCX4 644 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 SYDE2Q5VT97 1194 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 USP30Q70CQ3 517 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 CBARPQ8N350 705 aaPredicted RBP7.38□□□□□ -1.23
CCDC58-204ENST00000479414 GAB3Q8WWW8 586 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 EAF2Q96CJ1 260 aaPredicted RBP7.38□□□□□ -1.23
CCDC58-204ENST00000479414 ADAM7Q9H2U9 754 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 SEC61A2Q9H9S3 476 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.38□□□□□ -1.23
CCDC58-204ENST00000479414 DNAI1Q9UI46 699 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 USP18Q9UMW8 372 aa7.38□□□□□ -1.23
CCDC58-204ENST00000479414 WASHC2AQ641Q2 1341 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 A0A0G2JLL6 359 aaPredicted RBP7.37□□□□□ -1.23
CCDC58-204ENST00000479414 ARHGAP6O43182 974 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 LAMTOR5O43504 91 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 NRP2O60462 931 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 HGFACQ04756 655 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 PPARAQ07869 468 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 TBR1Q16650 682 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 RNF151Q2KHN1 245 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 ARHGEF18Q6ZSZ5 1173 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 FERMT3Q86UX7 667 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 OR14C36Q8NHC7 312 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 MTMR8Q96EF0 704 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 ASPSCR1Q9BZE9 553 aa7.37□□□□□ -1.23
CCDC58-204ENST00000479414 TYW1Q9NV66 732 aaKnown RBP7.37□□□□□ -1.23
CCDC58-204ENST00000479414 TRIM75PA6NK02 468 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 LPLP06858 475 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 PDGFRBP09619 1106 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 LGALS4P56470 323 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 MRPS9P82933 396 aaKnown RBP7.36□□□□□ -1.23
CCDC58-204ENST00000479414 ITKQ08881 620 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 ADAM15Q13444 863 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 PLEKHG6Q3KR16 790 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 UBXN11Q5T124 520 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 GAREM2Q75VX8 874 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 KCNK18Q7Z418 384 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 CLEC14AQ86T13 490 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 TGFBRAP1Q8WUH2 860 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 FDXACB1Q9BRP7 624 aaPredicted RBP7.36□□□□□ -1.23
CCDC58-204ENST00000479414 TRHDEQ9UKU6 1024 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 FAM184BQ9ULE4 1060 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 NR2E1Q9Y466 385 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 CDY2AQ9Y6F7 541 aa7.36□□□□□ -1.23
CCDC58-204ENST00000479414 C2orf78A6NCI8 922 aa7.35□□□□□ -1.23
CCDC58-204ENST00000479414 PRICKLE3O43900 615 aaPredicted RBP7.35□□□□□ -1.23
CCDC58-204ENST00000479414 FSBPO95073 299 aa7.35□□□□□ -1.23
CCDC58-204ENST00000479414 PLATP00750 562 aa7.35□□□□□ -1.23
CCDC58-204ENST00000479414 XPAP23025 273 aaPredicted RBP7.35□□□□□ -1.23
CCDC58-204ENST00000479414 IARSP41252 1262 aaKnown RBP7.35□□□□□ -1.23
CCDC58-204ENST00000479414 SPIDRQ14159 915 aa7.35□□□□□ -1.23
CCDC58-204ENST00000479414 TBC1D10BQ4KMP7 808 aaPredicted RBP7.35□□□□□ -1.23
CCDC58-204ENST00000479414 CFHR4Q92496 578 aa7.35□□□□□ -1.23
CCDC58-204ENST00000479414 SLC7A6OSQ96CW6 309 aaPredicted RBP7.35□□□□□ -1.23
CCDC58-204ENST00000479414 SMAD5Q99717 465 aaKnown RBP7.35□□□□□ -1.23
CCDC58-204ENST00000479414 MSL2Q9HCI7 577 aa7.35□□□□□ -1.23
CCDC58-204ENST00000479414 JADE2Q9NQC1 790 aa7.35□□□□□ -1.23
CCDC58-204ENST00000479414 CCM2LQ9NUG4 571 aaPredicted RBP7.35□□□□□ -1.23
CCDC58-204ENST00000479414 EVLQ9UI08 416 aaPredicted RBP7.35□□□□□ -1.23
CCDC58-204ENST00000479414 PMS2P1A4D2B8 440 aa7.34□□□□□ -1.23
CCDC58-204ENST00000479414 GABRDO14764 452 aa7.34□□□□□ -1.23
CCDC58-204ENST00000479414 MTHFD2P13995 350 aa7.34□□□□□ -1.23
CCDC58-204ENST00000479414 HNRNPLP14866 589 aaKnown RBP eCLIP7.34□□□□□ -1.23
CCDC58-204ENST00000479414 NRG3P56975 720 aa7.34□□□□□ -1.23
CCDC58-204ENST00000479414 RAC3P60763 192 aa7.34□□□□□ -1.23
CCDC58-204ENST00000479414 SLFN13Q68D06 897 aa7.34□□□□□ -1.23
CCDC58-204ENST00000479414 GLB1L2Q8IW92 636 aa7.34□□□□□ -1.23
CCDC58-204ENST00000479414 RAVER1Q8IY67 606 aaKnown RBP7.34□□□□□ -1.23
CCDC58-204ENST00000479414 UNC5BQ8IZJ1 945 aa7.34□□□□□ -1.23
CCDC58-204ENST00000479414 GCDHQ92947 438 aaPredicted RBP7.34□□□□□ -1.23
CCDC58-204ENST00000479414 NEIL1Q96FI4 390 aaPredicted RBP7.34□□□□□ -1.23
CCDC58-204ENST00000479414 C20orf173Q96LM9 149 aa7.34□□□□□ -1.23
CCDC58-204ENST00000479414 MEGF9Q9H1U4 602 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms