RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 GCLMP48507 274 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 UGCGQ16739 394 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 MCTP2Q6DN12 878 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 NT5DC3Q86UY8 548 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 CPNE8Q86YQ8 564 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 ARHGEF19Q8IW93 802 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 IQCKQ8N0W5 287 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 SLC30A5Q8TAD4 765 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 PLEKHO2Q8TD55 490 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 SCFD2Q8WU76 684 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 ZNF341Q9BYN7 854 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 THAP2Q9H0W7 228 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 CCPG1Q9ULG6 757 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 COG5Q9UP83 839 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 STXBP5LQ9Y2K9 1186 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 BZW2Q9Y6E2 419 aaKnown RBP11.75□□□□□ -0.53
VPS52-217ENST00000478934 ATAD5Q96QE3 1844 aa11.75□□□□□ -0.53
VPS52-217ENST00000478934 GOLGA8KD6RF30 607 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 BACH1O14867 736 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 EIF3DO15371 548 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS52-217ENST00000478934 SART1O43290 800 aaKnown RBP11.74□□□□□ -0.53
VPS52-217ENST00000478934 OPA1O60313 960 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 CAP2P40123 477 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 ZNF131P52739 623 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 SEC24CP53992 1094 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 SOX10P56693 466 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 PPP3CAQ08209 521 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 PRPF4BQ13523 1007 aaKnown RBP11.74□□□□□ -0.53
VPS52-217ENST00000478934 DCAF12L1Q5VU92 463 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 B3GNT9Q6UX72 402 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 HS2ST1Q7LGA3 356 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 CHURC1Q8WUH1 139 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 GMLQ99445 158 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 MXRA8Q9BRK3 442 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 KIFC3Q9BVG8 833 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 TEKT3Q9BXF9 490 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 RAVER2Q9HCJ3 691 aaKnown RBP11.74□□□□□ -0.53
VPS52-217ENST00000478934 DMAC2Q9NW81 257 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 PLAAQ9Y263 795 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 MRPL11Q9Y3B7 192 aaKnown RBP11.74□□□□□ -0.53
VPS52-217ENST00000478934 TELO2Q9Y4R8 837 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 KRIT1O00522 736 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 TTI1O43156 1089 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 SORBS3O60504 671 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 CALCAP01258 141 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 ALAS1P13196 640 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 CORO7P57737 925 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
VPS52-217ENST00000478934 PAK2Q13177 524 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 GLE1Q53GS7 698 aaKnown RBP11.74□□□□□ -0.53
VPS52-217ENST00000478934 CEP85LQ5SZL2 805 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 MICALL1Q8N3F8 863 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 FLAD1Q8NFF5 587 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 STK33Q9BYT3 514 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 BCCIPQ9P287 314 aaKnown RBP eCLIP11.74□□□□□ -0.53
VPS52-217ENST00000478934 RNF14Q9UBS8 474 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 FZD1Q9UP38 647 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 FRMD4BQ9Y2L6 1034 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 ZHX2Q9Y6X8 837 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 EMSYQ7Z589 1322 aa11.74□□□□□ -0.53
VPS52-217ENST00000478934 DHX15O43143 795 aaKnown RBP11.73□□□□□ -0.53
VPS52-217ENST00000478934 DAPK3O43293 454 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 ATP9AO75110 1047 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 FERP16591 822 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 EIF2AK2P19525 551 aaKnown RBP11.73□□□□□ -0.53
VPS52-217ENST00000478934 TNFRSF8P28908 595 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 USP8P40818 1118 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 NPEPPSP55786 919 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 MRPS9P82933 396 aaKnown RBP11.73□□□□□ -0.53
VPS52-217ENST00000478934 MYL7Q01449 175 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 LLGL1Q15334 1064 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 SLC15A2Q16348 729 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 SPDYE2Q495Y8 402 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 MIER3Q7Z3K6 550 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 OGFOD1Q8N543 542 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 LMO3Q8TAP4 145 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 DPH5Q9H2P9 285 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 UBE2TQ9NPD8 197 aaPredicted RBP11.73□□□□□ -0.53
VPS52-217ENST00000478934 FAM169AQ9Y6X4 670 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 MYH11P35749 1972 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 TMEM110-MUSTN1A8MSY1 372 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 BTNL10A8MVZ5 291 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
VPS52-217ENST00000478934 SF3A3Q12874 501 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■■□□□ 13.6
VPS52-217ENST00000478934 BFSP1Q12934 665 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 PLA2G4FQ68DD2 849 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 SLFN11Q7Z7L1 901 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 CLEC4DQ8WXI8 215 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 WNK4Q96J92 1243 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 TAAR1Q96RJ0 339 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 POP1Q99575 1024 aaKnown RBP11.73□□□□□ -0.53
VPS52-217ENST00000478934 TRIM51Q9BSJ1 452 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 SYT11Q9BT88 431 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 TMOD4Q9NZQ9 345 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 APEX2Q9UBZ4 518 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 NDUFAB1O14561 156 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 SLC16A4O15374 487 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 PPP1R37O75864 691 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 FGGP02679 453 aa11.73□□□□□ -0.53
VPS52-217ENST00000478934 MYCLP12524 364 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms