RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MICU3Q86XE3 530 aa22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 SMAP1Q8IYB5 467 aaPredicted RBP22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 KCNK12Q9HB15 430 aa22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 EPG5Q9HCE0 2579 aa22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 DACT1Q9NYF0 836 aa22.95■■□□□ 1.26
PDLIM1-202ENST00000477757 MYH9P35579 1960 aaKnown RBP22.94■■□□□ 1.26
PDLIM1-202ENST00000477757 LMNAP02545 664 aaKnown RBP22.94■■□□□ 1.26
PDLIM1-202ENST00000477757 EFCAB12Q6NXP0 572 aa22.94■■□□□ 1.26
PDLIM1-202ENST00000477757 TRMT1LQ7Z2T5 733 aaKnown RBP22.94■■□□□ 1.26
PDLIM1-202ENST00000477757 LRRC71Q8N4P6 559 aa22.94■■□□□ 1.26
PDLIM1-202ENST00000477757 IGSF21Q96ID5 467 aa22.94■■□□□ 1.26
PDLIM1-202ENST00000477757 FAM167AQ96KS9 214 aa22.94■■□□□ 1.26
PDLIM1-202ENST00000477757 CEP250Q9BV73 2442 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 hCG_1984214I3L0E3 225 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 PSAPP07602 524 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 GPC3P51654 580 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 PTPN14Q15678 1187 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 DGLUCYQ7Z3D6 616 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 SGMS1Q86VZ5 419 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 ZNF713Q8N859 430 aaPredicted RBP22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 BCL7CQ8WUZ0 217 aaPredicted RBP22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 CRYGNQ8WXF5 182 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 GLT8D2Q9H1C3 349 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 TBC1D22BQ9NU19 505 aa22.93■■□□□ 1.26
PDLIM1-202ENST00000477757 OTOGLQ3ZCN5 2332 aa22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 SETQ01105 290 aaPredicted RBP22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 KCNG4Q8TDN1 519 aa22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 ZNF668Q96K58 619 aaPredicted RBP22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 SCLT1Q96NL6 688 aa22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 ZNF577Q9BSK1 485 aa22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 IGSF9Q9P2J2 1179 aa22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 GABBR1Q9UBS5 961 aa22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 PCDHA10Q9Y5I2 948 aa22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 C2orf16Q68DN1 1984 aa22.92■■□□□ 1.26
PDLIM1-202ENST00000477757 SMCO2A6NFE2 343 aa22.91■■□□□ 1.26
PDLIM1-202ENST00000477757 CYP3A4P08684 503 aa22.91■■□□□ 1.26
PDLIM1-202ENST00000477757 FGFR4P22455 802 aa22.91■■□□□ 1.26
PDLIM1-202ENST00000477757 FUT2Q10981 343 aa22.91■■□□□ 1.26
PDLIM1-202ENST00000477757 C15orf39Q6ZRI6 1047 aa22.91■■□□□ 1.26
PDLIM1-202ENST00000477757 TRAIPQ9BWF2 469 aa22.91■■□□□ 1.26
PDLIM1-202ENST00000477757 VN1R3Q9BXE9 311 aa22.91■■□□□ 1.26
PDLIM1-202ENST00000477757 BARHL2Q9NY43 387 aa22.91■■□□□ 1.26
PDLIM1-202ENST00000477757 TCEAL9Q9UHQ7 104 aa22.91■■□□□ 1.26
PDLIM1-202ENST00000477757 CACNA1BQ00975 2339 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 SPDYE4A6NLX3 237 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 PHKA2P46019 1235 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 CLCN4P51793 760 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 LETM2Q2VYF4 491 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 KIAA2013Q8IYS2 634 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 LRRC2Q9BYS8 371 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 NRDE2Q9H7Z3 1164 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 TBC1D13Q9NVG8 400 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 RBM28Q9NW13 759 aaKnown RBP22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 WNT16Q9UBV4 365 aa22.9■■□□□ 1.26
PDLIM1-202ENST00000477757 NARSO43776 548 aaKnown RBP22.89■■□□□ 1.25
PDLIM1-202ENST00000477757 OATP04181 439 aa22.89■■□□□ 1.25
PDLIM1-202ENST00000477757 GALTP07902 379 aa22.89■■□□□ 1.25
PDLIM1-202ENST00000477757 APOA5Q6Q788 366 aa22.89■■□□□ 1.25
PDLIM1-202ENST00000477757 GLB1LQ6UWU2 654 aa22.89■■□□□ 1.25
PDLIM1-202ENST00000477757 NLRP7Q8WX94 980 aa22.89■■□□□ 1.25
PDLIM1-202ENST00000477757 CHST12Q9NRB3 414 aa22.89■■□□□ 1.25
PDLIM1-202ENST00000477757 STK39Q9UEW8 545 aa22.89■■□□□ 1.25
PDLIM1-202ENST00000477757 R4GN57 208 aa22.89■■□□□ 1.25
PDLIM1-202ENST00000477757 KRBA1A5PL33 1030 aa22.88■■□□□ 1.25
PDLIM1-202ENST00000477757 ZNF862O60290 1169 aa22.88■■□□□ 1.25
PDLIM1-202ENST00000477757 N4BP1O75113 896 aaKnown RBP22.88■■□□□ 1.25
PDLIM1-202ENST00000477757 CMASQ8NFW8 434 aaPredicted RBP22.88■■□□□ 1.25
PDLIM1-202ENST00000477757 EMILIN2Q9BXX0 1053 aa22.88■■□□□ 1.25
PDLIM1-202ENST00000477757 KMT2BQ9UMN6 2715 aaPredicted RBP22.88■■□□□ 1.25
PDLIM1-202ENST00000477757 WDR81Q562E7 1941 aa22.88■■□□□ 1.25
PDLIM1-202ENST00000477757 WDR64B1ANS9 1081 aa22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 SLC11A1P49279 550 aa22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 PRKCEQ02156 737 aa22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 PUM1Q14671 1186 aaKnown RBP eCLIP22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 NOMO2Q5JPE7 1267 aa22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 JAKMIP3Q5VZ66 844 aa22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 LPPQ93052 612 aa22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 KLHL5Q96PQ7 755 aa22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 DNAJB4Q9UDY4 337 aa22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 SAMM50Q9Y512 469 aa22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 V9GY48 417 aaPredicted RBP22.87■■□□□ 1.25
PDLIM1-202ENST00000477757 SLC27A2O14975 620 aa22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 CSDE1O75534 798 aaKnown RBP22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 CFHP08603 1231 aa22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 CNPP09543 421 aaKnown RBP22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 SKIP12755 728 aa22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 RFX1P22670 979 aa22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 RNASELQ05823 741 aaKnown RBP22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 ZC3H14Q6PJT7 736 aaKnown RBP22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 SYNE3Q6ZMZ3 975 aa22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 TBC1D17Q9HA65 648 aa22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 NRBP2Q9NSY0 501 aa22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 INPP5FQ9Y2H2 1132 aa22.86■■□□□ 1.25
PDLIM1-202ENST00000477757 MEIS3P2A8K0S8 358 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 STK25O00506 426 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 B4GALT3O60512 393 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 SFPQP23246 707 aaKnown RBP eCLIP22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 KLRC2P26717 231 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 TBC1D8BQ0IIM8 1120 aa22.85■■□□□ 1.25
PDLIM1-202ENST00000477757 NONOQ15233 471 aaKnown RBP eCLIP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms