RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 OPHN1O60890 802 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 PCDH8O95206 1070 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 ITGB3P05106 788 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 TMPRSS15P98073 1019 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 NFYCQ13952 458 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 RNF151Q2KHN1 245 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 RNF219Q5W0B1 726 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-207ENST00000476742 UNQ6494/PRO21346Q6UXR6 183 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 CXorf67Q86X51 503 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-207ENST00000476742 CIR1Q86X95 450 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-207ENST00000476742 GCDHQ92947 438 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-207ENST00000476742 NEIL1Q96FI4 390 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-207ENST00000476742 WDR92Q96MX6 357 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 LRRC37BQ96QE4 947 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 ANO3Q9BYT9 981 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 PITHD1Q9GZP4 211 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-207ENST00000476742 KIAA1683Q9H0B3 1180 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 C12orf65Q9H3J6 166 aaKnown RBP4.46□□□□□ -1.7
NPHP3-207ENST00000476742 MSL2Q9HCI7 577 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 PPP4R1LQ9P1A2 415 aa4.46□□□□□ -1.7
NPHP3-207ENST00000476742 ELL2O00472 640 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-207ENST00000476742 MATN3O15232 486 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 NRP2O60462 931 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 FSBPO95073 299 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 EYA4O95677 639 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 CR2P20023 1033 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 XPAP23025 273 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-207ENST00000476742 ANTXR2P58335 489 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 ADAM15Q13444 863 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 LIMS2Q7Z4I7 341 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 SPATS2Q86XZ4 545 aaKnown RBP4.45□□□□□ -1.7
NPHP3-207ENST00000476742 BCL6BQ8N143 479 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-207ENST00000476742 CDYL2Q8N8U2 506 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 CLRN3Q8NCR9 226 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 GIMAP8Q8ND71 665 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-207ENST00000476742 RSAD2Q8WXG1 361 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 SLC7A6OSQ96CW6 309 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-207ENST00000476742 LOXL4Q96JB6 756 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 ACAP3Q96P50 834 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 SEMA4AQ9H3S1 761 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 MS4A5Q9H3V2 200 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 DNAI1Q9UI46 699 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 USP18Q9UMW8 372 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 OAZ3Q9UMX2 235 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 CTDP1Q9Y5B0 961 aaPredicted RBP4.45□□□□□ -1.7
NPHP3-207ENST00000476742 PCDHB6Q9Y5E3 794 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 NUMBLQ9Y6R0 609 aa4.45□□□□□ -1.7
NPHP3-207ENST00000476742 PRSS38A1L453 326 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 LCHNA4D1U4 455 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 GOLGA8BA8MQT2 603 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 GPR39O43194 453 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 CDC14BO60729 498 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 GPR15P49685 360 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 MANFP55145 182 aaKnown RBP4.44□□□□□ -1.7
NPHP3-207ENST00000476742 NRG3P56975 720 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 TBR1Q16650 682 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 CCDC178Q5BJE1 867 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 ZBTB41Q5SVQ8 909 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 ZNF662Q6ZS27 426 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 TAX1BP1Q86VP1 789 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 CHST13Q8NET6 341 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 OR14K1Q8NGZ2 314 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 ZCRB1Q8TBF4 217 aaKnown RBP4.44□□□□□ -1.7
NPHP3-207ENST00000476742 GAB3Q8WWW8 586 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 NKD2Q969F2 451 aaPredicted RBP4.44□□□□□ -1.7
NPHP3-207ENST00000476742 RBM15Q96T37 977 aaKnown RBP eCLIP4.44□□□□□ -1.7
NPHP3-207ENST00000476742 PTPN18Q99952 460 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 OSBPL6Q9BZF3 934 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 HAPLN2Q9GZV7 340 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 ATP8A1Q9Y2Q0 1164 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 PPP2R3BQ9Y5P8 575 aa4.44□□□□□ -1.7
NPHP3-207ENST00000476742 RBM8AQ9Y5S9 174 aaKnown RBP4.44□□□□□ -1.7
NPHP3-207ENST00000476742 PMS2P1A4D2B8 440 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 GOLGA8AA7E2F4 631 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 SLPIP03973 132 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 PFKMP08237 780 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 CLEC2LP0C7M8 214 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 RPS19P39019 145 aaKnown RBP4.43□□□□□ -1.7
NPHP3-207ENST00000476742 KRTAP10-7P60409 375 aaPredicted RBP4.43□□□□□ -1.7
NPHP3-207ENST00000476742 UGT8Q16880 541 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 KRT40Q6A162 431 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 CCDC62Q6P9F0 684 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 LMBR1LQ6UX01 489 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 DDX42Q86XP3 938 aaKnown RBP eCLIP4.43□□□□□ -1.7
NPHP3-207ENST00000476742 PLA2G15Q8NCC3 412 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 OR14C36Q8NHC7 312 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 AHCYL2Q96HN2 611 aaKnown RBP4.43□□□□□ -1.7
NPHP3-207ENST00000476742 SAMD11Q96NU1 681 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 UIMC1Q96RL1 719 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 MEGF9Q9H1U4 602 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 SLC6A15Q9H2J7 730 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 NELFAQ9H3P2 528 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 TOPORSQ9NS56 1045 aaPredicted RBP4.43□□□□□ -1.7
NPHP3-207ENST00000476742 SHROOM4Q9ULL8 1493 aa4.43□□□□□ -1.7
NPHP3-207ENST00000476742 GPR42O15529 346 aa4.42□□□□□ -1.7
NPHP3-207ENST00000476742 SLC26A4O43511 780 aa4.42□□□□□ -1.7
NPHP3-207ENST00000476742 IBSPP21815 317 aaPredicted RBP4.42□□□□□ -1.7
NPHP3-207ENST00000476742 ENPP1P22413 925 aa4.42□□□□□ -1.7
NPHP3-207ENST00000476742 BPIFB4P59827 614 aa4.42□□□□□ -1.7
NPHP3-207ENST00000476742 ATP2C1P98194 919 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms