RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ADAMTS10Q9H324 1103 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 ZSWIM4Q9H7M6 989 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 TTC12Q9H892 705 aaPredicted RBP12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 CACNA1HO95180 2353 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 DCHS1Q96JQ0 3298 aa12.74□□□□□ -0.37
NUDCD3-206ENST00000475952 TRIP11Q15643 1979 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 C5orf67F2Z3F1 127 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 GAS2O43903 313 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 MGEA5O60502 916 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 DARSP14868 501 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 MCM7P33993 719 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 RFC5P40937 340 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 TXKP42681 527 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 DRP2Q13474 957 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 PAN2Q504Q3 1202 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 HFE2Q6ZVN8 426 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 RHPN2Q8IUC4 686 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 MRPL38Q96DV4 380 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 DYDC2Q96IM9 177 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 ZNF668Q96K58 619 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 EIF2AK1Q9BQI3 630 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 PLVAPQ9BX97 442 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 INO80BQ9C086 356 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 LMAN2LQ9H0V9 348 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 ELAC1Q9H777 363 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 TMEM161AQ9NX61 479 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 DACT1Q9NYF0 836 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 RGL1Q9NZL6 768 aa12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 SUCLA2Q9P2R7 463 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 WRAP73Q9P2S5 460 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 NOL7Q9UMY1 257 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 MRPL42Q9Y6G3 142 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-206ENST00000475952 A0A087WZ62 844 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 C9IYK1 514 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 H3BQ06 376 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 WNT7AO00755 349 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 HOXA2O43364 376 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 ATP2B1P20020 1258 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 BMPR1AP36894 532 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 TRAPPC10P48553 1259 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 MCM2P49736 904 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 NPEPPSP55786 919 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 ZP2Q05996 745 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 CTTNQ14247 550 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 XKR9Q5GH70 373 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 NOSTRINQ8IVI9 506 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 TPH2Q8IWU9 490 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 TCP11Q8WWU5 503 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 NLRP4Q96MN2 994 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 MTMR9Q96QG7 549 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 MTRQ99707 1265 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 FDXACB1Q9BRP7 624 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 DHX33Q9H6R0 707 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 ATP6V0A4Q9HBG4 840 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 COL4A3BPQ9Y5P4 624 aa12.72□□□□□ -0.37
NUDCD3-206ENST00000475952 CITO14578 2027 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 POTEMA6NI47 508 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 SLITRK3O94933 977 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 OR52Z1P0C646 297 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 LINC00271P0C7V0 271 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 GATMP50440 423 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 DSC3Q14574 896 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 EMC2Q15006 297 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 NAALADL2Q58DX5 795 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 TTC38Q5R3I4 469 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 SPOUT1Q5T280 376 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 PSPC1Q8WXF1 523 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 P2RX5Q93086 422 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 CHST12Q9NRB3 414 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 AAASQ9NRG9 546 aa12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 BMP2KQ9NSY1 1161 aaPredicted RBP12.71□□□□□ -0.37
NUDCD3-206ENST00000475952 TBKBP1A7MCY6 615 aa12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 LYPLA2O95372 231 aa12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 ABI1Q8IZP0 508 aa12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 ERMNQ8TAM6 284 aa12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 TMX3Q96JJ7 454 aa12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 TBC1D32Q96NH3 1257 aa12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 HSD17B14Q9BPX1 270 aa12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 TMEM60Q9H2L4 133 aa12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 NSUN3Q9H649 340 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 ANKEF1Q9NU02 776 aa12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 PIN4Q9Y237 131 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-206ENST00000475952 ASAP2O43150 1006 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 DGAT1O75907 488 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 FGFR1P11362 822 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 FGFR4P22455 802 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 U2AF2P26368 475 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■□□□ 13.5
NUDCD3-206ENST00000475952 FAM189BP81408 668 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 COL19A1Q14993 1142 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 ZNF174Q15697 407 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 FAM102BQ5T8I3 360 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 HAUS3Q68CZ6 603 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 TWF2Q6IBS0 349 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 CATSPER4Q7RTX7 472 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
NUDCD3-206ENST00000475952 ADHFE1Q8IWW8 467 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms