RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 TRIM17Q9Y577 477 aa22.82■■□□□ 1.24
SMIM11A-204ENST00000474455 LRRC10BA6NIK2 292 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 ZNF286BP0CG31 522 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 TLK2Q86UE8 772 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 ANKZF1Q9H8Y5 726 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 LZTFL1Q9NQ48 299 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 SEPT9Q9UHD8 586 aaPredicted RBP22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 DBR1Q9UK59 544 aaKnown RBP22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 FAM184BQ9ULE4 1060 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 ARHGEF35A5YM69 484 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 MYL1P05976 194 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 PRKAR2AP13861 404 aaKnown RBP22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 BEND6Q5SZJ8 279 aaPredicted RBP22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 PADI6Q6TGC4 694 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 KCTD17Q8N5Z5 321 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 GOLGA5Q8TBA6 731 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 AFAP1L1Q8TED9 768 aa22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 TRIP12Q14669 1992 aaPredicted RBP22.81■■□□□ 1.24
SMIM11A-204ENST00000474455 NKRFO15226 690 aaKnown RBP eCLIP22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 LGALS2P05162 132 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 KRT18P05783 430 aaKnown RBP22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 MMP3P08254 477 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 CD44P16070 742 aaKnown RBP22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 BEX3Q00994 111 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 ZNF569Q5MCW4 686 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 GLIS3Q8NEA6 775 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 ANKRD20A12PQ8NF67 263 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 PPP1R13LQ8WUF5 828 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 NAPGQ99747 312 aaPredicted RBP22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 AZI2Q9H6S1 392 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 TBC1D7Q9P0N9 293 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 MAPK8IP1Q9UQF2 711 aa22.8■■□□□ 1.24
SMIM11A-204ENST00000474455 USO1O60763 962 aaKnown RBP22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 OATP04181 439 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 SOX10P56693 466 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 STK4Q13043 487 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 MTERF2Q49AM1 385 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 FAM160B1Q5W0V3 765 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 CNNM4Q6P4Q7 775 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 CYP26C1Q6V0L0 522 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 UNC13DQ70J99 1090 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 CEP170P1Q96L14 293 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 FGFBP2Q9BYJ0 223 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 RNPEPQ9H4A4 650 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 ZHX3Q9H4I2 956 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 ANKEF1Q9NU02 776 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 PANK4Q9NVE7 773 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 RWDD2AQ9UIY3 292 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 PTCH2Q9Y6C5 1203 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 MYADML2A6NDP7 307 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 RHOBTB3O94955 611 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 AKR1A1P14550 325 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 XKR3Q5GH77 459 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 NEK11Q8NG66 645 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 C16orf70Q9BSU1 422 aa22.79■■□□□ 1.24
SMIM11A-204ENST00000474455 EMSYQ7Z589 1322 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 GNRH1P01148 92 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 GYPCP04921 128 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 CASP14P31944 242 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 COASYQ13057 564 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 PLCB4Q15147 1175 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 PLPPR4Q7Z2D5 763 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 LRRC27Q9C0I9 530 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 ACBD3Q9H3P7 528 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 SLC39A2Q9NP94 309 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 GPRC5CQ9NQ84 441 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 CYP26B1Q9NR63 512 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 TMEM51Q9NW97 253 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 ADAM21Q9UKJ8 722 aa22.78■■□□□ 1.24
SMIM11A-204ENST00000474455 EHHADHQ08426 723 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 KCNB1Q14721 858 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 KLHL10Q6JEL2 608 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 OTUD6AQ7L8S5 288 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 DAW1Q8N136 415 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 CEP89Q96ST8 783 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 IRX2Q9BZI1 471 aaPredicted RBP22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 EXOC1Q9NV70 894 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 RMND1Q9NWS8 449 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 CTAGE15A4D2H0 777 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 A6NJR5 290 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 DKC1O60832 514 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 PPFIA4O75335 1185 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 HMGCRP04035 888 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 CTAGE8P0CG41 777 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 CTAGE6Q86UF2 777 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 CTAGE4Q8IX94 777 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 KIAA0895Q8NCT3 520 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 ZBTB10Q96DT7 871 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 CCDC43Q96MW1 224 aaKnown RBP22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 SMARCAD1Q9H4L7 1026 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 L1RE1Q9UN81 338 aa22.77■■□□□ 1.24
SMIM11A-204ENST00000474455 PVALEFA0A1B0GWK0 134 aa22.76■■□□□ 1.23
SMIM11A-204ENST00000474455 FRMD3A2A2Y4 597 aa22.76■■□□□ 1.23
SMIM11A-204ENST00000474455 HIP1RO75146 1068 aa22.76■■□□□ 1.23
SMIM11A-204ENST00000474455 PGK1P00558 417 aa22.76■■□□□ 1.23
SMIM11A-204ENST00000474455 STX17P56962 302 aa22.76■■□□□ 1.23
SMIM11A-204ENST00000474455 MAPK7Q13164 816 aa22.76■■□□□ 1.23
SMIM11A-204ENST00000474455 ZSCAN26Q16670 478 aa22.76■■□□□ 1.23
SMIM11A-204ENST00000474455 ZNF658Q5TYW1 1059 aaPredicted RBP22.76■■□□□ 1.23
SMIM11A-204ENST00000474455 SLC35F6Q8N357 371 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms