RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 K7ENM7 598 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 EIF3DO15371 548 aaKnown RBP eCLIP11.83□□□□□ -0.52
SP140-208ENST00000473711 ADCY3O60266 1144 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 MYL3P08590 195 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 HSPA1AP0DMV8 641 aaKnown RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 HSPA1BP0DMV9 641 aaKnown RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 MAPTP10636 758 aaKnown RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 HOXD8P13378 290 aaPredicted RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 INSRRP14616 1297 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 ARL2P36404 184 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 NPTX2P47972 431 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 SMTNP53814 917 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 UBASH3AP57075 661 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 IGBP1P78318 339 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 BEX3Q00994 111 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 LRRC63Q05C16 580 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 CACNB2Q08289 660 aaPredicted RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 KCNA1Q09470 495 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 TBC1D8BQ0IIM8 1120 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 BMT2Q1RMZ1 405 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 ZNF484Q5JVG2 852 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 HAUS6Q7Z4H7 955 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 IRF2BP1Q8IU81 584 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 DRC7Q8IY82 874 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 RAET1EQ8TD07 263 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 SLC7A3Q8WY07 619 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 PDLIM2Q96JY6 352 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 IFT74Q96LB3 600 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 STRA6Q9BX79 667 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 XPO4Q9C0E2 1151 aaKnown RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 THAP9Q9H5L6 903 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 TUT1Q9H6E5 874 aaKnown RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 SUGCTQ9HAC7 445 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 KMT5AQ9NQR1 393 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 SAGE1Q9NXZ1 904 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 MAGEC2Q9UBF1 373 aaPredicted RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 ZNF215Q9UL58 517 aaPredicted RBP11.83□□□□□ -0.52
SP140-208ENST00000473711 PPME1Q9Y570 386 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 WDR81Q562E7 1941 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 MYH9P35579 1960 aaKnown RBP11.82□□□□□ -0.52
SP140-208ENST00000473711 KCNJ18B7U540 433 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 PDXKO00764 312 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 CBFA2T2O43439 604 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 CALUO43852 315 aaPredicted RBP11.82□□□□□ -0.52
SP140-208ENST00000473711 DUSP11O75319 330 aaKnown RBP11.82□□□□□ -0.52
SP140-208ENST00000473711 FGFR1OPO95684 399 aaKnown RBP11.82□□□□□ -0.52
SP140-208ENST00000473711 GNRH1P01148 92 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 CCND3P30281 292 aaPredicted RBP11.82□□□□□ -0.52
SP140-208ENST00000473711 NCKAP1LP55160 1127 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 CHMP4BP1P59074 171 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 DMP1Q13316 513 aaPredicted RBP11.82□□□□□ -0.52
SP140-208ENST00000473711 KCNJ12Q14500 433 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 ZCWPW2Q504Y3 356 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 BRDTQ58F21 947 aaPredicted RBP11.82□□□□□ -0.52
SP140-208ENST00000473711 TCP11X2Q5H9J9 407 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 SYCP3Q8IZU3 236 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 SPC24Q8NBT2 197 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 ASAP3Q8TDY4 903 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 SPIRE2Q8WWL2 714 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 ZBTB10Q96DT7 871 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 KIFC3Q9BVG8 833 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 IKZF4Q9H2S9 585 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 C17orf75Q9HAS0 396 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 LHX6Q9UPM6 363 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 LOXHD1Q8IVV2 1947 aa11.82□□□□□ -0.52
SP140-208ENST00000473711 CLIC2O15247 247 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 SEPT4O43236 478 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 TGFB1I1O43294 461 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 GLRA2P23416 452 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 KLRC1P26715 233 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 CPT1AP50416 773 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 COPB1P53618 953 aaKnown RBP11.81□□□□□ -0.52
SP140-208ENST00000473711 RTP1P59025 263 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 GTF2BQ00403 316 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 FKBP3Q00688 224 aaKnown RBP11.81□□□□□ -0.52
SP140-208ENST00000473711 MAP2K1Q02750 393 aaPredicted RBP11.81□□□□□ -0.52
SP140-208ENST00000473711 SPAG1Q07617 926 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 DRP2Q13474 957 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 ALCAMQ13740 583 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 KRT31Q15323 416 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 FSCN1Q16658 493 aaKnown RBP11.81□□□□□ -0.52
SP140-208ENST00000473711 IER5Q5VY09 327 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 EFCAB12Q6NXP0 572 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 FOXR2Q6PJQ5 311 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 FAM114A1Q8IWE2 563 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 EXOC8Q8IYI6 725 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 LRRC71Q8N4P6 559 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 METTL13Q8N6R0 699 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 SLC17A8Q8NDX2 589 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 TMEM161BQ8NDZ6 487 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 ANKRD20A12PQ8NF67 263 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 PPP1R13LQ8WUF5 828 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 MRFAP1L1Q96HT8 127 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 CNOT6LQ96LI5 555 aaKnown RBP11.81□□□□□ -0.52
SP140-208ENST00000473711 ACCSQ96QU6 501 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 NTPCRQ9BSD7 190 aaKnown RBP11.81□□□□□ -0.52
SP140-208ENST00000473711 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 VPS16Q9H269 839 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms