RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 MAGEB2O15479 319 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 HOXA2O43364 376 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 N4BP1O75113 896 aaKnown RBP14.27□□□□□ -0.13
TRAF4-209ENST00000473421 ZC3H11AO75152 810 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRAF4-209ENST00000473421 OATP04181 439 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 PSAPP07602 524 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 GALTP07902 379 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 MYBP10242 640 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 MTHFRP42898 656 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 PRKCEQ02156 737 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 TARBP2Q15633 366 aaKnown RBP14.27□□□□□ -0.13
TRAF4-209ENST00000473421 PFKFB3Q16875 520 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-209ENST00000473421 KIAA1841Q6NSI8 718 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 ZNF280BQ86YH2 543 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 TDRD5Q8NAT2 981 aaKnown RBP14.27□□□□□ -0.13
TRAF4-209ENST00000473421 FLCNQ8NFG4 579 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 NECTIN4Q96NY8 510 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 IRF2BPLQ9H1B7 796 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 ANO2Q9NQ90 1003 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 TBC1D22BQ9NU19 505 aa14.27□□□□□ -0.13
TRAF4-209ENST00000473421 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
TRAF4-209ENST00000473421 DBR1Q9UK59 544 aaKnown RBP14.27□□□□□ -0.13
TRAF4-209ENST00000473421 MSH4O15457 936 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 NARSO43776 548 aaKnown RBP14.26□□□□□ -0.13
TRAF4-209ENST00000473421 EOMESO95936 686 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 PHKA2P46019 1235 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 SLC11A1P49279 550 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 ALDH7A1P49419 539 aaKnown RBP14.26□□□□□ -0.13
TRAF4-209ENST00000473421 NUBP1P53384 320 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 SYNE3Q6ZMZ3 975 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 KSR1Q8IVT5 923 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 ADSSL1Q8N142 457 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 RSAD2Q8WXG1 361 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 IGSF21Q96ID5 467 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 MAP7D2Q96T17 732 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 ZMYND12Q9H0C1 365 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 UNC45AQ9H3U1 944 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 DISC1Q9NRI5 854 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 TBC1D13Q9NVG8 400 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 SAMM50Q9Y512 469 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 FRYLO94915 3013 aa14.26□□□□□ -0.13
TRAF4-209ENST00000473421 A0A087WZ62 844 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 CHMP2AO43633 222 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 OFD1O75665 1012 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 DDHD2O94830 711 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 SSBP05455 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRAF4-209ENST00000473421 CTSAP10619 480 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 CIITAP33076 1130 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 CLCN5P51795 746 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 PTPN14Q15678 1187 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 ATAT1Q5SQI0 421 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 FAM43BQ6ZT52 329 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-209ENST00000473421 DHX32Q7L7V1 743 aaKnown RBP14.25□□□□□ -0.13
TRAF4-209ENST00000473421 DDX53Q86TM3 631 aaKnown RBP14.25□□□□□ -0.13
TRAF4-209ENST00000473421 SMAP1Q8IYB5 467 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-209ENST00000473421 NLRP7Q8WX94 980 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 TMEM169Q96HH4 297 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 SCLT1Q96NL6 688 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 FDXACB1Q9BRP7 624 aaPredicted RBP14.25□□□□□ -0.13
TRAF4-209ENST00000473421 GBP3Q9H0R5 595 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 MFSD1Q9H3U5 465 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 CYP26B1Q9NR63 512 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 INPP5FQ9Y2H2 1132 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 IRAK3Q9Y616 596 aa14.25□□□□□ -0.13
TRAF4-209ENST00000473421 EP300Q09472 2414 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-209ENST00000473421 hCG_1984214I3L0E3 225 aa14.24□□□□□ -0.13
TRAF4-209ENST00000473421 LILRB3O75022 631 aa14.24□□□□□ -0.13
TRAF4-209ENST00000473421 CNPP09543 421 aaKnown RBP14.24□□□□□ -0.13
TRAF4-209ENST00000473421 POTEGQ6S5H5 508 aa14.24□□□□□ -0.13
TRAF4-209ENST00000473421 TAS1R1Q7RTX1 841 aa14.24□□□□□ -0.13
TRAF4-209ENST00000473421 GPR149Q86SP6 731 aa14.24□□□□□ -0.13
TRAF4-209ENST00000473421 ZNF713Q8N859 430 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-209ENST00000473421 ST13P5Q8NFI4 369 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-209ENST00000473421 PHKBQ93100 1093 aa14.24□□□□□ -0.13
TRAF4-209ENST00000473421 NKD2Q969F2 451 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-209ENST00000473421 KCNK12Q9HB15 430 aa14.24□□□□□ -0.13
TRAF4-209ENST00000473421 CEP131Q9UPN4 1083 aa14.24□□□□□ -0.13
TRAF4-209ENST00000473421 USTQ9Y2C2 406 aa14.24□□□□□ -0.13
TRAF4-209ENST00000473421 IGKV6-21A0A0C4DH24 114 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 ESYT2A0FGR8 921 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 WDR64B1ANS9 1081 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 AOC1P19801 751 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 TMOD1P28289 359 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 TBC1D8BQ0IIM8 1120 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 MTERF2Q49AM1 385 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 NOMO2Q5JPE7 1267 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 CABP7Q86V35 215 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 TEX2Q8IWB9 1127 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 SIX5Q8N196 739 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 REXO1Q8N1G1 1221 aaKnown RBP14.23□□□□□ -0.13
TRAF4-209ENST00000473421 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
TRAF4-209ENST00000473421 SLC5A5Q92911 643 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 FAM167AQ96KS9 214 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 KLHL5Q96PQ7 755 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 NRBP2Q9NSY0 501 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 NAP1L2Q9ULW6 460 aaPredicted RBP14.23□□□□□ -0.13
TRAF4-209ENST00000473421 ZNF292O60281 2723 aa14.23□□□□□ -0.13
TRAF4-209ENST00000473421 DNAH14Q0VDD8 3507 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 KRBA1A5PL33 1030 aa14.22□□□□□ -0.13
TRAF4-209ENST00000473421 F8W810 466 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms