RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 SPATA31C1P0DKV0 1188 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 DARSP14868 501 aaKnown RBP16.81■□□□□ 0.28
CALD1-215ENST00000472096 ERVK-21P61565 698 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 CDC42EP1Q00587 391 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 PTGDRQ13258 359 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 RILPL1Q5EBL4 403 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 ZNF410Q86VK4 478 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 RHPN2Q8IUC4 686 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 EXOC8Q8IYI6 725 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 CRIPAKQ8N1N5 446 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 TGS1Q96RS0 853 aaKnown RBP16.81■□□□□ 0.28
CALD1-215ENST00000472096 TUFT1Q9NNX1 390 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 ANKEF1Q9NU02 776 aa16.81■□□□□ 0.28
CALD1-215ENST00000472096 A0A087WZ62 844 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 DENND3A2RUS2 1198 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 K7ELQ4 463 aaPredicted RBP16.8■□□□□ 0.28
CALD1-215ENST00000472096 RFXAPO00287 272 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 LAD1O00515 517 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 SARSP49591 514 aaKnown RBP16.8■□□□□ 0.28
CALD1-215ENST00000472096 DSC3Q14574 896 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 HAUS3Q68CZ6 603 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 CATSPER3Q86XQ3 398 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 ERMNQ8TAM6 284 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 TMEM143Q96AN5 459 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 CCDC43Q96MW1 224 aaKnown RBP16.8■□□□□ 0.28
CALD1-215ENST00000472096 MTRQ99707 1265 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 ADAM2Q99965 735 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 FDXACB1Q9BRP7 624 aaPredicted RBP16.8■□□□□ 0.28
CALD1-215ENST00000472096 POLR3CQ9BUI4 534 aaPredicted RBP16.8■□□□□ 0.28
CALD1-215ENST00000472096 GCOM2Q9BZD3 368 aaPredicted RBP16.8■□□□□ 0.28
CALD1-215ENST00000472096 XPNPEP1Q9NQW7 623 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 RGS18Q9NS28 235 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 C1orf112Q9NSG2 853 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 COL4A3BPQ9Y5P4 624 aa16.8■□□□□ 0.28
CALD1-215ENST00000472096 PRUNE2Q8WUY3 3088 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 C9IYK1 514 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 DGKIO75912 1065 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 STAG3L1P0CL83 205 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 IGFBP4P22692 258 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 RPA1P27694 616 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 PRPHP41219 470 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 RARRES1P49788 294 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 POTEGQ6S5H5 508 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 KSR1Q8IVT5 923 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 PIGOQ8TEQ8 1089 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 GDPD5Q8WTR4 605 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 TCP11Q8WWU5 503 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 PSPC1Q8WXF1 523 aaKnown RBP16.79■□□□□ 0.28
CALD1-215ENST00000472096 ZNF689Q96CS4 500 aaPredicted RBP16.79■□□□□ 0.28
CALD1-215ENST00000472096 INTS4Q96HW7 963 aaKnown RBP16.79■□□□□ 0.28
CALD1-215ENST00000472096 NLRP4Q96MN2 994 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 C17orf80Q9BSJ5 609 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 ATP6V0A4Q9HBG4 840 aa16.79■□□□□ 0.28
CALD1-215ENST00000472096 MYH11P35749 1972 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 PLXNA4Q9HCM2 1894 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 A0A087WWV3 80 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 LPXNO60711 386 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 CSDE1O75534 798 aaKnown RBP16.78■□□□□ 0.28
CALD1-215ENST00000472096 DGAT1O75907 488 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 FGFR4P22455 802 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 ATP2C1P98194 919 aaPredicted RBP16.78■□□□□ 0.28
CALD1-215ENST00000472096 GRB10Q13322 594 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 SLC24A5Q71RS6 500 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 IGSF22Q8N9C0 903 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 SNX21Q969T3 373 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 SAMD11Q96NU1 681 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 LRWD1Q9UFC0 647 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 LRFN2Q9ULH4 789 aa16.78■□□□□ 0.28
CALD1-215ENST00000472096 VPS37CA5D8V6 355 aaPredicted RBP16.77■□□□□ 0.28
CALD1-215ENST00000472096 LINC00271P0C7V0 271 aa16.77■□□□□ 0.28
CALD1-215ENST00000472096 XRCC6P12956 609 aaKnown RBP eCLIP16.77■□□□□ 0.28
CALD1-215ENST00000472096 POU3F3P20264 500 aaPredicted RBP16.77■□□□□ 0.28
CALD1-215ENST00000472096 PDCP20941 246 aa16.77■□□□□ 0.28
CALD1-215ENST00000472096 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.28
CALD1-215ENST00000472096 SFPQP23246 707 aaKnown RBP eCLIP16.77■□□□□ 0.28
CALD1-215ENST00000472096 BRAPQ7Z569 592 aa16.77■□□□□ 0.28
CALD1-215ENST00000472096 FERMT3Q86UX7 667 aa16.77■□□□□ 0.28
CALD1-215ENST00000472096 CMTR2Q8IYT2 770 aaKnown RBP16.77■□□□□ 0.28
CALD1-215ENST00000472096 FIBCD1Q8N539 461 aa16.77■□□□□ 0.28
CALD1-215ENST00000472096 PRPF31Q8WWY3 499 aaKnown RBP16.77■□□□□ 0.28
CALD1-215ENST00000472096 RAB34Q9BZG1 259 aa16.77■□□□□ 0.28
CALD1-215ENST00000472096 DBR1Q9UK59 544 aaKnown RBP16.77■□□□□ 0.28
CALD1-215ENST00000472096 REV3LO60673 3130 aa16.77■□□□□ 0.27
CALD1-215ENST00000472096 USO1O60763 962 aaKnown RBP16.76■□□□□ 0.27
CALD1-215ENST00000472096 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
CALD1-215ENST00000472096 MUTP22033 750 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 CCT6AP40227 531 aaKnown RBP16.76■□□□□ 0.27
CALD1-215ENST00000472096 GATMP50440 423 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 LAMTOR4Q0VGL1 99 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 BTG3Q14201 252 aaPredicted RBP16.76■□□□□ 0.27
CALD1-215ENST00000472096 PDIA5Q14554 519 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 IL17AQ16552 155 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 EPC2Q52LR7 807 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 TMEM192Q8IY95 271 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 NACC1Q96RE7 527 aa16.76■□□□□ 0.27
CALD1-215ENST00000472096 INO80BQ9C086 356 aaPredicted RBP16.76■□□□□ 0.27
CALD1-215ENST00000472096 TMEM161AQ9NX61 479 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms