RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 SP100P23497 879 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 BTG3Q14201 252 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 ZMYM1Q5SVZ6 1142 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 E4F1Q66K89 784 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 ANKRD40Q6AI12 368 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 FAM173BQ6P4H8 233 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 ADGRF4Q8IZF3 695 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 AGBL3Q8NEM8 1001 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 GOLGA8QA0A0J9YX86 632 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 LRRD1A4D1F6 860 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 GOLGA8OA6NCC3 632 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 GOLGA8NF8WBI6 632 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 AGRPO00253 132 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 CAND2O75155 1236 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 GFPT2O94808 682 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 SF3A3Q12874 501 aaKnown RBP eCLIP9.18□□□□□ -0.94
CD47-204ENST00000471694 RBBP7Q16576 425 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 ERO1BQ86YB8 467 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 ARHGAP24Q8N264 748 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 MRPS31Q92665 395 aaKnown RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 CLIC6Q96NY7 704 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 GLIS2Q9BZE0 524 aaPredicted RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 ORC6Q9Y5N6 252 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 ARHGAP42A6NI28 874 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 TXNDC9O14530 226 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 CTNND1O60716 968 aaKnown RBP9.18□□□□□ -0.94
CD47-204ENST00000471694 ANP32DO95626 131 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 ATP11AP98196 1134 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 TNS4Q8IZW8 715 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 CEP120Q8N960 986 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 FBXL13Q8NEE6 735 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 FAM71BQ8TC56 605 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 ASNSD1Q9NWL6 643 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 ABCC12Q96J65 1359 aa9.18□□□□□ -0.94
CD47-204ENST00000471694 POC1B-GALNT4F8VUJ3 575 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 P4HBP07237 508 aaKnown RBP9.17□□□□□ -0.94
CD47-204ENST00000471694 H2AFZP0C0S5 128 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 NDUFV1P49821 464 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 EPHB3P54753 998 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 EVCP57679 992 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 LAMC2Q13753 1193 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 STARD3Q14849 445 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 H2AFVQ71UI9 128 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 SLC44A5Q8NCS7 719 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 EMILIN3Q9NT22 766 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 SUPT3HB4E1H0 165 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 MBL2P11226 248 aaPredicted RBP9.17□□□□□ -0.94
CD47-204ENST00000471694 MTX1Q13505 466 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 MTMR3Q13615 1198 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 KLHL40Q2TBA0 621 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 PREPLQ4J6C6 727 aaPredicted RBP9.17□□□□□ -0.94
CD47-204ENST00000471694 LLGL2Q6P1M3 1020 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 ZBTB18Q99592 522 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 AATKQ6ZMQ8 1374 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 TTC37Q6PGP7 1564 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 DBN1Q16643 649 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 CHST13Q8NET6 341 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 FAM76AQ8TAV0 307 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 DBNLQ9UJU6 430 aaKnown RBP9.17□□□□□ -0.94
CD47-204ENST00000471694 MAGEB2O15479 319 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 PFKFB1P16118 471 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 TAC1P20366 129 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 WEE1P30291 646 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 SULT1E1P49888 294 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 NAA35Q5VZE5 725 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 SCYL3Q8IZE3 742 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 ABHD8Q96I13 439 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 CASS4Q9NQ75 786 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 ABI2Q9NYB9 513 aaPredicted RBP9.17□□□□□ -0.94
CD47-204ENST00000471694 VPS18Q9P253 973 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 KDM6AO15550 1401 aaPredicted RBP9.17□□□□□ -0.94
CD47-204ENST00000471694 H0Y626 953 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 MYO1DO94832 1006 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 STX2P32856 288 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 CAPZA2P47755 286 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 PTH1RQ03431 593 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 C10orf120Q5SQS8 335 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 VSIG1Q86XK7 387 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 SAMD9LQ8IVG5 1584 aa9.17□□□□□ -0.94
CD47-204ENST00000471694 UBXN8O00124 270 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 CAPRIN1Q14444 709 aaKnown RBP9.16□□□□□ -0.94
CD47-204ENST00000471694 PCGF5Q86SE9 256 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 VPS39Q96JC1 886 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 TESK2Q96S53 571 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 SPATA16Q9BXB7 569 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 DPH5Q9H2P9 285 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 PASKQ96RG2 1323 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 FAM47E-STBD1D6RA91 191 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 CHADLQ6NUI6 762 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 SCFD2Q8WU76 684 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 DBR1Q9UK59 544 aaKnown RBP9.16□□□□□ -0.94
CD47-204ENST00000471694 PCDHA10Q9Y5I2 948 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 AK9Q5TCS8 1911 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 IPO5O00410 1097 aaKnown RBP9.16□□□□□ -0.94
CD47-204ENST00000471694 DDX5P17844 614 aaKnown RBP9.16□□□□□ -0.94
CD47-204ENST00000471694 EFCAB12Q6NXP0 572 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 LRRC43Q8N309 656 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 EEF2KMTQ96G04 330 aa9.16□□□□□ -0.94
CD47-204ENST00000471694 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.16□□□□□ -0.94
CD47-204ENST00000471694 RSPH14Q9UHP6 348 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms