RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 MAGEB3O15480 346 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 KRT36O76013 467 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 BAG2O95816 211 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 LYNP07948 512 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 PYGMP11217 842 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 KRT13P13646 458 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 FGFR4P22455 802 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 CTDSPL2Q05D32 466 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 LSAMPQ13449 338 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 SLC4A8Q2Y0W8 1093 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 KHDC1Q4VXA5 237 aaKnown RBP4.55□□□□□ -1.68
VPS50-210ENST00000471188 LRRC74BQ6ZQY2 392 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 ZNF554Q86TJ5 538 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 EXOC3L1Q86VI1 746 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 SCUBE1Q8IWY4 988 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 CYP4X1Q8N118 509 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 ADSSL1Q8N142 457 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 NME8Q8N427 588 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 CCDC24Q8N4L8 307 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 LZICQ8WZA0 190 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 MCUR1Q96AQ8 359 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 FAM136AQ96C01 138 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 IFT43Q96FT9 208 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 ABHD8Q96I13 439 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 CATSPER2Q96P56 530 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 OLFM3Q96PB7 478 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 SMC6Q96SB8 1091 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 CYTH2Q99418 400 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 TTYH3Q9C0H2 523 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 NACA2Q9H009 215 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 KIAA1683Q9H0B3 1180 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 BRD8Q9H0E9 1235 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 ADAM7Q9H2U9 754 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 LGR6Q9HBX8 967 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 PCDH18Q9HCL0 1135 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 UBAP1Q9NZ09 502 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 ADAMTS1Q9UHI8 967 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 RASAL2Q9UJF2 1139 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 SUGT1Q9Y2Z0 365 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 FCF1Q9Y324 198 aaKnown RBP4.55□□□□□ -1.68
VPS50-210ENST00000471188 SNX24Q9Y343 169 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 SLC4A7Q9Y6M7 1214 aa4.55□□□□□ -1.68
VPS50-210ENST00000471188 PPLO60437 1756 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PASKQ96RG2 1323 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PCDH11XQ9BZA7 1347 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 A0A0J9YVX5 310 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 BOLA2-SMG1P6H3BVE0 249 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 GPAA1O43292 621 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PRDM1O75626 825 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ATP5HO75947 161 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 AGTP01019 485 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ASLP04424 464 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 VAV1P15498 845 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 RASA1P20936 1047 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 COPB2P35606 906 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 GCGRP47871 477 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 IGBP1P78318 339 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PTPN12Q05209 780 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 RAPGEF1Q13905 1077 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 NTRK3Q16288 839 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 KLC3Q6P597 504 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CCDC174Q6PII3 467 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PEX26Q7Z412 305 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ECHDC2Q86YB7 292 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CCDC65Q8IXS2 484 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 VPS52Q8N1B4 723 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 SPIRE2Q8WWL2 714 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PRPF31Q8WWY3 499 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 TUBGCP5Q96RT8 1024 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PABPC3Q9H361 631 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 DNAJC17Q9NVM6 304 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 NKIRAS1Q9NYS0 192 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 SUCLA2Q9P2R7 463 aaPredicted RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 TBK1Q9UHD2 729 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 R3HDM2Q9Y2K5 976 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 N4BP2Q86UW6 1770 aaPredicted RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 PRAMEF22A3QJZ6 481 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 FAM196BA6NMK8 535 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ATP5J2-PTCD1G3V325 749 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 TXNDC9O14530 226 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PTCD1O75127 700 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 DEXIO95424 95 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 ADH1BP00325 375 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CREB1P16220 341 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 NAT1P18440 290 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 MARK3P27448 753 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 SLC19A1P41440 591 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CDK17Q00537 523 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CDR2Q01850 454 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PDE4DQ08499 809 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 R3HDM1Q15032 1099 aaKnown RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 LONRF1Q17RB8 773 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PARP6Q2NL67 630 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 CERKLQ49MI3 558 aaPredicted RBP4.54□□□□□ -1.68
VPS50-210ENST00000471188 TTC38Q5R3I4 469 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 MEI1Q5TIA1 1274 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 PHLDB3Q6NSJ2 640 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 TRIM67Q6ZTA4 783 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 SAPCD2Q86UD0 394 aa4.54□□□□□ -1.68
VPS50-210ENST00000471188 DNAAF5Q86Y56 855 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms