RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 USP30Q70CQ3 517 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 LIMS2Q7Z4I7 341 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 CXorf38Q8TB03 319 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 LRRC37BQ96QE4 947 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 DPYSL5Q9BPU6 564 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 TRIM8Q9BZR9 551 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 OR10A2Q9H208 303 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 USP18Q9UMW8 372 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 EDARQ9UNE0 448 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 NR2E1Q9Y466 385 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 PCDHB6Q9Y5E3 794 aa7.6□□□□□ -1.19
SSB-209ENST00000470621 ARHGAP6O43182 974 aa7.59□□□□□ -1.19
SSB-209ENST00000470621 ZNF568Q3ZCX4 644 aa7.59□□□□□ -1.19
SSB-209ENST00000470621 TGFBRAP1Q8WUH2 860 aa7.59□□□□□ -1.19
SSB-209ENST00000470621 NEIL1Q96FI4 390 aaPredicted RBP7.59□□□□□ -1.19
SSB-209ENST00000470621 GNRHR2Q96P88 292 aa7.59□□□□□ -1.19
SSB-209ENST00000470621 RBM15Q96T37 977 aaKnown RBP eCLIP7.59□□□□□ -1.19
SSB-209ENST00000470621 FDXACB1Q9BRP7 624 aaPredicted RBP7.59□□□□□ -1.19
SSB-209ENST00000470621 PCDH12Q9NPG4 1184 aa7.59□□□□□ -1.19
SSB-209ENST00000470621 JADE2Q9NQC1 790 aa7.59□□□□□ -1.19
SSB-209ENST00000470621 C14orf119Q9NWQ9 140 aa7.59□□□□□ -1.19
SSB-209ENST00000470621 CTDP1Q9Y5B0 961 aaPredicted RBP7.59□□□□□ -1.19
SSB-209ENST00000470621 C2orf78A6NCI8 922 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 GPR42O15529 346 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 CDK11BP21127 795 aaKnown RBP7.58□□□□□ -1.2
SSB-209ENST00000470621 SCAND1P57086 179 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 HGFACQ04756 655 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 NFYCQ13952 458 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 SURF1Q15526 300 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 SLC41A1Q8IVJ1 513 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 PRPF38AQ8NAV1 312 aaKnown RBP7.58□□□□□ -1.2
SSB-209ENST00000470621 EAF2Q96CJ1 260 aaPredicted RBP7.58□□□□□ -1.2
SSB-209ENST00000470621 HIST1H2AHQ96KK5 128 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 WDR92Q96MX6 357 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 LMF1Q96S06 567 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 HIST1H2AJQ99878 128 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 EVLQ9UI08 416 aaPredicted RBP7.58□□□□□ -1.2
SSB-209ENST00000470621 VWA7Q9Y334 891 aa7.58□□□□□ -1.2
SSB-209ENST00000470621 ITGB3P05106 788 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 ERVK-21P61565 698 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 PPARAQ07869 468 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 FAM50AQ14320 339 aaKnown RBP7.57□□□□□ -1.2
SSB-209ENST00000470621 SLFN13Q68D06 897 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 GAREM2Q75VX8 874 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 CDYL2Q8N8U2 506 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 LMBR1Q8WVP7 490 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 KCTD10Q9H3F6 313 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 SLC5A4Q9NY91 659 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 PRSS50Q9UI38 385 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 OAZ3Q9UMX2 235 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 RBM8AQ9Y5S9 174 aaKnown RBP7.57□□□□□ -1.2
SSB-209ENST00000470621 NUMBLQ9Y6R0 609 aa7.57□□□□□ -1.2
SSB-209ENST00000470621 RAC3P60763 192 aa7.56□□□□□ -1.2
SSB-209ENST00000470621 ATP2C1P98194 919 aaPredicted RBP7.56□□□□□ -1.2
SSB-209ENST00000470621 SAFB2Q14151 953 aaKnown RBP eCLIP7.56□□□□□ -1.28e-9■■■□□ 15.2
SSB-209ENST00000470621 FSCN1Q16658 493 aaKnown RBP7.56□□□□□ -1.2
SSB-209ENST00000470621 PTPROQ16827 1216 aa7.56□□□□□ -1.2
SSB-209ENST00000470621 CNTD1Q8N815 330 aa7.56□□□□□ -1.2
SSB-209ENST00000470621 GAB3Q8WWW8 586 aa7.56□□□□□ -1.2
SSB-209ENST00000470621 AHCYL2Q96HN2 611 aaKnown RBP7.56□□□□□ -1.2
SSB-209ENST00000470621 SEC61A2Q9H9S3 476 aa7.56□□□□□ -1.2
SSB-209ENST00000470621 SHROOM4Q9ULL8 1493 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 NPEPPSL1A6NEC2 478 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 GOLGA8AA7E2F4 631 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 GOLGA8BA8MQT2 603 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 H2AFYO75367 372 aaKnown RBP7.55□□□□□ -1.2
SSB-209ENST00000470621 SEC24DO94855 1032 aaPredicted RBP7.55□□□□□ -1.2
SSB-209ENST00000470621 ENPP1P22413 925 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 LGALS4P56470 323 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 KRTAP10-2P60368 255 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 ADAM8P78325 824 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 PLP2Q04941 152 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 CD69Q07108 199 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 DUSP8Q13202 625 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 CLEC14AQ86T13 490 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 TAX1BP1Q86VP1 789 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 PIK3C3Q8NEB9 887 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 PPP1R14CQ8TAE6 165 aa7.55□□□□□ -1.2
SSB-209ENST00000470621 GFM2Q969S9 779 aaKnown RBP7.55□□□□□ -1.2
SSB-209ENST00000470621 QRSL1Q9H0R6 528 aaKnown RBP7.55□□□□□ -1.2
SSB-209ENST00000470621 CDC14BO60729 498 aa7.54□□□□□ -1.2
SSB-209ENST00000470621 ADCY7P51828 1080 aa7.54□□□□□ -1.2
SSB-209ENST00000470621 TCIRG1Q13488 830 aa7.54□□□□□ -1.2
SSB-209ENST00000470621 MTMR1Q13613 665 aa7.54□□□□□ -1.2
SSB-209ENST00000470621 UGT8Q16880 541 aa7.54□□□□□ -1.2
SSB-209ENST00000470621 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.54□□□□□ -1.2
SSB-209ENST00000470621 GLB1LQ6UWU2 654 aa7.54□□□□□ -1.2
SSB-209ENST00000470621 GPR135Q8IZ08 494 aa7.54□□□□□ -1.2
SSB-209ENST00000470621 SLC7A6OSQ96CW6 309 aaPredicted RBP7.54□□□□□ -1.2
SSB-209ENST00000470621 ACAP3Q96P50 834 aa7.54□□□□□ -1.2
SSB-209ENST00000470621 C12orf65Q9H3J6 166 aaKnown RBP7.54□□□□□ -1.2
SSB-209ENST00000470621 AGO3Q9H9G7 860 aaKnown RBP7.54□□□□□ -1.2
SSB-209ENST00000470621 PUF60Q9UHX1 559 aaKnown RBP7.54□□□□□ -1.2
SSB-209ENST00000470621 KCNG1Q9UIX4 513 aa7.54□□□□□ -1.2
SSB-209ENST00000470621 FOXS1O43638 330 aa7.53□□□□□ -1.2
SSB-209ENST00000470621 KATNA1O75449 491 aa7.53□□□□□ -1.2
SSB-209ENST00000470621 LY86O95711 162 aa7.53□□□□□ -1.2
SSB-209ENST00000470621 GAAP10253 952 aa7.53□□□□□ -1.2
SSB-209ENST00000470621 CR2P20023 1033 aa7.53□□□□□ -1.2
SSB-209ENST00000470621 GPR3P46089 330 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms