RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 MICAL1Q8TDZ2 1067 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 TTC1Q99614 292 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 VCXQ9H320 206 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 LRRD1A4D1F6 860 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 GUCY2DQ02846 1103 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 TROAPQ12815 778 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 PTPROQ16827 1216 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 CCNYQ8ND76 341 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 MXRA8Q9BRK3 442 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 ANAPC5Q9UJX4 755 aa16.18■□□□□ 0.18
LIMS2-213ENST00000469300 GTF2A2P52657 109 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 TFDP2Q14188 446 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 ANKRD20A3Q5VUR7 823 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 NAA35Q5VZE5 725 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 PPP4R1Q8TF05 950 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 C7orf25Q9BPX7 421 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 PLEKHA4Q9H4M7 779 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 MED4Q9NPJ6 270 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 SPATS2LQ9NUQ6 558 aaKnown RBP16.17■□□□□ 0.18
LIMS2-213ENST00000469300 MAD1L1Q9Y6D9 718 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 KIF1AQ12756 1690 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 HOXA10P31260 410 aaPredicted RBP16.17■□□□□ 0.18
LIMS2-213ENST00000469300 TSNAXIP1Q2TAA8 658 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 KIF20BQ96Q89 1820 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 TRIM62Q9BVG3 475 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 PP2D1A8MPX8 630 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 CCDC188H7C350 402 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 SLC16A3O15427 465 aaKnown RBP16.17■□□□□ 0.18
LIMS2-213ENST00000469300 SNRPFP62306 86 aaKnown RBP16.17■□□□□ 0.18
LIMS2-213ENST00000469300 MAP7Q14244 749 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 VSIG1Q86XK7 387 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 PRMT6Q96LA8 375 aaPredicted RBP16.17■□□□□ 0.18
LIMS2-213ENST00000469300 HINFPQ9BQA5 517 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 RABEP2Q9H5N1 569 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 RBAKQ9NYW8 714 aaPredicted RBP16.17■□□□□ 0.18
LIMS2-213ENST00000469300 BRD2P25440 801 aaKnown RBP16.17■□□□□ 0.18
LIMS2-213ENST00000469300 GPRASP2Q96D09 838 aa16.17■□□□□ 0.18
LIMS2-213ENST00000469300 SPDYE16A6NNV3 312 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 SPDYE2Q495Y8 402 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 RBM41Q96IZ5 413 aaKnown RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 GPBP1L1Q9HC44 474 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 PXDNQ92626 1479 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 GCLCP48506 637 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 YWHAGP61981 247 aaKnown RBP eCLIP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 CCDC13Q8IYE1 715 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 TTC13Q8NBP0 860 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 ACRBPQ8NEB7 543 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 FBXL13Q8NEE6 735 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 CABS1Q96KC9 395 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 PPP1R12CQ9BZL4 782 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 INPP5FQ9Y2H2 1132 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 TRIM49BA6NDI0 452 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 SOWAHDA6NJG2 315 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 ICAM1P05362 532 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 FKBP1AP62942 108 aaKnown RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 MOXD1Q6UVY6 613 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 CLEC10AQ8IUN9 316 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 RNF149Q8NC42 400 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 MTIF3Q9H2K0 278 aaKnown RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 ANKEF1Q9NU02 776 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 SPTLC3Q9NUV7 552 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 F8W8V4 182 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 MYCP01106 439 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 GPC5P78333 572 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 CCDC38Q502W7 563 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 ARHGEF18Q6ZSZ5 1173 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 CYFIP1Q7L576 1253 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 KCNB2Q92953 911 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 NUDT12Q9BQG2 462 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 RTFDC1Q9BY42 306 aaPredicted RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 ASNSD1Q9NWL6 643 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 STAP1Q9ULZ2 295 aa16.16■□□□□ 0.18
LIMS2-213ENST00000469300 MAP2P11137 1827 aaKnown RBP16.16■□□□□ 0.18
LIMS2-213ENST00000469300 KLRK1P26718 216 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 STMN2Q93045 179 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 SUCLA2Q9P2R7 463 aaPredicted RBP16.15■□□□□ 0.18
LIMS2-213ENST00000469300 CNOT8Q9UFF9 292 aaKnown RBP16.15■□□□□ 0.18
LIMS2-213ENST00000469300 MROH1Q8NDA8 1641 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 PRKCBP05771 671 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 INHBAP08476 426 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 PSMA2P25787 234 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 EPHB4P54760 987 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 CASP7P55210 303 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 SH3BGRP55822 239 aaPredicted RBP16.15■□□□□ 0.18
LIMS2-213ENST00000469300 CXCL9Q07325 125 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 C9orf131Q5VYM1 1079 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 SDCCAG8Q86SQ7 713 aaPredicted RBP16.15■□□□□ 0.18
LIMS2-213ENST00000469300 GMCL1Q96IK5 515 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 RGL1Q9NZL6 768 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 UBE4BO95155 1302 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 ATP8B1O43520 1251 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 GAS2O43903 313 aaKnown RBP16.15■□□□□ 0.18
LIMS2-213ENST00000469300 RPA1P27694 616 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 CASP1P29466 404 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.18
LIMS2-213ENST00000469300 TMEM270Q6UE05 265 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 ATG4CQ96DT6 458 aa16.15■□□□□ 0.18
LIMS2-213ENST00000469300 NGRNQ9NPE2 291 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms