RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 LAIR1Q6GTX8 287 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 BBXQ8WY36 941 aaPredicted RBP11.69□□□□□ -0.54
HDAC3-203ENST00000467533 SMG7Q92540 1137 aaKnown RBP11.69□□□□□ -0.54
HDAC3-203ENST00000467533 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 PIDD1Q9HB75 910 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 UBIAD1Q9Y5Z9 338 aa11.69□□□□□ -0.54
HDAC3-203ENST00000467533 FAM170BA6NMN3 283 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 PIK3CDO00329 1044 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 MEIS2O14770 477 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 BACH1O14867 736 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 GPR32O75388 356 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 LAMP2P13473 410 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 SLC26A2P50443 739 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 MFAP1P55081 439 aaKnown RBP11.68□□□□□ -0.54
HDAC3-203ENST00000467533 SHC2P98077 582 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 PRKCQQ04759 706 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 RNASELQ05823 741 aaKnown RBP11.68□□□□□ -0.54
HDAC3-203ENST00000467533 N4BP2L1Q5TBK1 243 aaPredicted RBP11.68□□□□□ -0.54
HDAC3-203ENST00000467533 IL31Q6EBC2 164 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 CYP26C1Q6V0L0 522 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 PRR23CQ6ZRP0 262 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 METTL13Q8N6R0 699 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 KRT23Q9C075 422 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 GBP3Q9H0R5 595 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 JADE2Q9NQC1 790 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 SEMA4GQ9NTN9 838 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 ZMIZ1Q9ULJ6 1067 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 MTF2Q9Y483 593 aaPredicted RBP11.68□□□□□ -0.54
HDAC3-203ENST00000467533 FRYQ5TBA9 3013 aa11.68□□□□□ -0.54
HDAC3-203ENST00000467533 RALGAPA1Q6GYQ0 2036 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 A0A0U1RQF3 1178 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 SOBPA7XYQ1 873 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 ANHXE9PGG2 379 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 C2CD2LO14523 706 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 LRP3O75074 770 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 RFPL2O75678 378 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 GPC5P78333 572 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 SEC23AQ15436 765 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 ZNF484Q5JVG2 852 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 FAM160B1Q5W0V3 765 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 PRR23BQ6ZRT6 265 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 ZNF598Q86UK7 904 aaKnown RBP11.67□□□□□ -0.54
HDAC3-203ENST00000467533 NELL1Q92832 810 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 PHKBQ93100 1093 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 DDX23Q9BUQ8 820 aaKnown RBP11.67□□□□□ -0.54
HDAC3-203ENST00000467533 VN1R3Q9BXE9 311 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 RHOBTB2Q9BYZ6 727 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 OSBPL6Q9BZF3 934 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 NRDE2Q9H7Z3 1164 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 CNNM2Q9H8M5 875 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 LTB4R2Q9NPC1 389 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 PRMT8Q9NR22 394 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-203ENST00000467533 MRPL17Q9NRX2 175 aaKnown RBP11.67□□□□□ -0.54
HDAC3-203ENST00000467533 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.67□□□□□ -0.54
HDAC3-203ENST00000467533 DPP7Q9UHL4 492 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 AKT3Q9Y243 479 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 INPP5FQ9Y2H2 1132 aa11.67□□□□□ -0.54
HDAC3-203ENST00000467533 FASNP49327 2511 aaKnown RBP11.66□□□□□ -0.54
HDAC3-203ENST00000467533 NFASCO94856 1347 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 CEP295Q9C0D2 2601 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 SPDYE3A6NKU9 549 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 MAFGO15525 162 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 GDF9O60383 454 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 C22orf31O95567 290 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 GLUD1P00367 558 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 URODP06132 367 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 ADH1AP07327 375 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 GALTP07902 379 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 RETP07949 1114 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 CD72P21854 359 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 SLC11A1P49279 550 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 CLCN3P51790 818 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 AK2P54819 239 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 NLRP11P59045 1033 aaKnown RBP11.66□□□□□ -0.54
HDAC3-203ENST00000467533 ZBTB41Q5SVQ8 909 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 RSPH1Q8WYR4 309 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 SCLT1Q96NL6 688 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 MAP7D2Q96T17 732 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 MYL10Q9BUA6 226 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 FAM126AQ9BYI3 521 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-203ENST00000467533 TBC1D13Q9NVG8 400 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 DACT1Q9NYF0 836 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 DNAJB4Q9UDY4 337 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 STK39Q9UEW8 545 aa11.66□□□□□ -0.54
HDAC3-203ENST00000467533 ZFYVE26Q68DK2 2539 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 SALL3Q9BXA9 1300 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 DDX39AO00148 427 aaKnown RBP11.65□□□□□ -0.54
HDAC3-203ENST00000467533 NCAM2O15394 837 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 FGFR4P22455 802 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.54
HDAC3-203ENST00000467533 CSRP2Q16527 193 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 UBE2SQ16763 222 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 IMMTQ16891 758 aaKnown RBP11.65□□□□□ -0.54
HDAC3-203ENST00000467533 LONRF3Q496Y0 759 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 SLC44A4Q53GD3 710 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 PDXDC2PQ6P474 469 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 GLB1LQ6UWU2 654 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 UNQ6494/PRO21346Q6UXR6 183 aa11.65□□□□□ -0.54
HDAC3-203ENST00000467533 CCDC60Q8IWA6 550 aaPredicted RBP11.65□□□□□ -0.54
HDAC3-203ENST00000467533 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms