RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 MYO10Q9HD67 2058 aa13.81□□□□□ -0.2
UBR4-211ENST00000467272 DENND4AQ7Z401 1863 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 CEP250Q9BV73 2442 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 PI15O43692 258 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 B4GALT3O60512 393 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 CXCL14O95715 111 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 EFEMP2O95967 443 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 ZSCAN20P17040 1043 aaPredicted RBP13.8□□□□□ -0.2
UBR4-211ENST00000467272 AOC1P19801 751 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 PHKA2P46019 1235 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 DRP2Q13474 957 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 UGCGQ16739 394 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 RTN1Q16799 776 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 RARS2Q5T160 578 aaKnown RBP13.8□□□□□ -0.2
UBR4-211ENST00000467272 JAKMIP3Q5VZ66 844 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 ERMP1Q7Z2K6 904 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 GPR149Q86SP6 731 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 ABI1Q8IZP0 508 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 VPS52Q8N1B4 723 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 MRPL9Q9BYD2 267 aaKnown RBP13.8□□□□□ -0.2
UBR4-211ENST00000467272 NID2Q14112 1375 aa13.8□□□□□ -0.2
UBR4-211ENST00000467272 OTOGLQ3ZCN5 2332 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 NT5C1B-RDH14C9J2C7 533 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 ZBTB43O43298 467 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 ZNF623O75123 536 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 OATP04181 439 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 GALTP07902 379 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 FGFR4P22455 802 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 TMOD1P28289 359 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 ZNF76P36508 570 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 ALDH7A1P49419 539 aaKnown RBP13.79□□□□□ -0.2
UBR4-211ENST00000467272 GIT2Q14161 759 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 PTPN14Q15678 1187 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 ATAT1Q5SQI0 421 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 MCTP2Q6DN12 878 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 CKAP2LQ8IYA6 745 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 CCDC105Q8IYK2 499 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 TDRD5Q8NAT2 981 aaKnown RBP13.79□□□□□ -0.2
UBR4-211ENST00000467272 AUTS2Q8WXX7 1259 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 MAP7D2Q96T17 732 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 NIFKQ9BYG3 293 aaKnown RBP13.79□□□□□ -0.2
UBR4-211ENST00000467272 RHOBTB2Q9BYZ6 727 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 CYP26B1Q9NR63 512 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 AKT3Q9Y243 479 aa13.79□□□□□ -0.2
UBR4-211ENST00000467272 CARNS1A5YM72 827 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 MEIS3P2A8K0S8 358 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 WDR64B1ANS9 1081 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 MSH4O15457 936 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 N4BP1O75113 896 aaKnown RBP13.78□□□□□ -0.2
UBR4-211ENST00000467272 CSDE1O75534 798 aaKnown RBP13.78□□□□□ -0.2
UBR4-211ENST00000467272 METAP2P50579 478 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBR4-211ENST00000467272 PRKCEQ02156 737 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 DHX32Q7L7V1 743 aaKnown RBP13.78□□□□□ -0.2
UBR4-211ENST00000467272 SLC5A5Q92911 643 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 NKD2Q969F2 451 aaPredicted RBP13.78□□□□□ -0.2
UBR4-211ENST00000467272 TMEM169Q96HH4 297 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 ZNF668Q96K58 619 aaPredicted RBP13.78□□□□□ -0.2
UBR4-211ENST00000467272 RIT2Q99578 217 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 DISC1Q9NRI5 854 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 TBC1D13Q9NVG8 400 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 DACT1Q9NYF0 836 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 GPR179Q6PRD1 2367 aa13.78□□□□□ -0.2
UBR4-211ENST00000467272 KMT2BQ9UMN6 2715 aaPredicted RBP13.77□□□□□ -0.2
UBR4-211ENST00000467272 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.77□□□□□ -0.21
UBR4-211ENST00000467272 OFD1O75665 1012 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 ADD1P35611 737 aaKnown RBP13.77□□□□□ -0.21
UBR4-211ENST00000467272 CLCN4P51793 760 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 CDC42EP1Q00587 391 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 TDGQ13569 410 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 PRR16Q569H4 304 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 SYNE3Q6ZMZ3 975 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 REXO1Q8N1G1 1221 aaKnown RBP13.77□□□□□ -0.21
UBR4-211ENST00000467272 RNF169Q8NCN4 708 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 CMASQ8NFW8 434 aaPredicted RBP13.77□□□□□ -0.21
UBR4-211ENST00000467272 TCEANC2Q96MN5 208 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 KCNK12Q9HB15 430 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 NRBP2Q9NSY0 501 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 DUSP12Q9UNI6 340 aa13.77□□□□□ -0.21
UBR4-211ENST00000467272 PSMD10O75832 226 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 SLC11A1P49279 550 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 NTRK3Q16288 839 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 NOMO2Q5JPE7 1267 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 TMC5Q6UXY8 1006 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 C15orf39Q6ZRI6 1047 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 MRPL10Q7Z7H8 261 aaKnown RBP13.76□□□□□ -0.21
UBR4-211ENST00000467272 ZNF280BQ86YH2 543 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
UBR4-211ENST00000467272 ADSSL1Q8N142 457 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 LPPQ93052 612 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 KLHL5Q96PQ7 755 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 SFXN1Q9H9B4 322 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 DNAJB4Q9UDY4 337 aa13.76□□□□□ -0.21
UBR4-211ENST00000467272 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
UBR4-211ENST00000467272 KLF18A0A0U1RQI7 1052 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 GOLGA8BA8MQT2 603 aa13.75□□□□□ -0.21
UBR4-211ENST00000467272 PRPF3O43395 683 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms