RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 DGKHQ86XP1 1220 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 PPP1R14CQ8TAE6 165 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 TSPEARQ8WU66 669 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 ACE2Q9BYF1 805 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 PRDM12Q9H4Q4 367 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 PRDM11Q9NQV5 511 aa5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 SAE1Q9UBE0 346 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 SAP30BPQ9UHR5 308 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-211ENST00000466538 A0A0G2JNJ9 132 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 H0Y858 1186 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 SEC24DO94855 1032 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 KRT18P05783 430 aaKnown RBP5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 CDK17Q00537 523 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 CAP1Q01518 475 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 MALLQ13021 153 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 ADRM1Q16186 407 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 MUM1L1Q5H9M0 696 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 ATAT1Q5SQI0 421 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 TMEM200BQ69YZ2 307 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 BTNL9Q6UXG8 535 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 STK32CQ86UX6 486 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 GLB1L2Q8IW92 636 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 THEMISQ8N1K5 641 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 SLC35G2Q8TBE7 412 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 COA7Q96BR5 231 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 ZBTB8AQ96BR9 441 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 SIGLEC10Q96LC7 697 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 SLC2A13Q96QE2 648 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 SYT3Q9BQG1 590 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 SGPP1Q9BX95 441 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 GREM2Q9H772 168 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 NMRK2Q9NPI5 230 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 OBP2AQ9NY56 170 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 GABBR1Q9UBS5 961 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 Q9UFV3 132 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 EVLQ9UI08 416 aaPredicted RBP5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 TUBD1Q9UJT1 453 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 CROTQ9UKG9 612 aa5.67□□□□□ -1.5
CDC42BPA-211ENST00000466538 OFD1O75665 1012 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 FSBPO95073 299 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 TAL1P17542 331 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 GLDCP23378 1020 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 IL13P35225 146 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 EPHB3P54753 998 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 SESN2P58004 480 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 ANTXR2P58335 489 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 KIF23Q02241 960 aaPredicted RBP5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 EIF4HQ15056 248 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 PRR31Q5SQ13 230 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 IFIT1BQ5T764 474 aaKnown RBP5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 GAREM2Q75VX8 874 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 OTOP2Q7RTS6 562 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 CCDC146Q8IYE0 955 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 Q8N3U1 123 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 PPM1NQ8N819 430 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 OR5AN1Q8NGI8 311 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 DYDC2Q96IM9 177 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 NOX5Q96PH1 765 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 SCOCQ9UIL1 159 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 VWA7Q9Y334 891 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 IRAK3Q9Y616 596 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 PMF1-BGLAPU3KQ54 211 aa5.66□□□□□ -1.5
CDC42BPA-211ENST00000466538 A0A0A6YYK5 440 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 VSTM5A8MXK1 200 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 CELA3BP08861 270 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 COL6A1P12109 1028 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 PDCP20941 246 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 RPL13P26373 211 aaKnown RBP5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 POLD1P28340 1107 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 MEF2AQ02078 507 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 RTP5Q14D33 572 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 LMBR1LQ6UX01 489 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 B3GNT9Q6UX72 402 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 PRR18Q8N4B5 295 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 HPS3Q969F9 1004 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 SOX7Q9BT81 388 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 SLC12A5Q9H2X9 1139 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 ANLNQ9NQW6 1124 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 C1orf112Q9NSG2 853 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 POLR3BQ9NW08 1133 aaPredicted RBP5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 SLC52A1Q9NWF4 448 aa5.65□□□□□ -1.5
CDC42BPA-211ENST00000466538 AP1G1O43747 822 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 CTNND1O60716 968 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 DTNBO60941 627 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 MYL1P05976 194 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 MED14OSP0DP75 135 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 GSPT1P15170 499 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 MCAMP43121 646 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 MLLT6P55198 1093 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 GBX1Q14549 363 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 ARHGAP29Q52LW3 1261 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 PHF19Q5T6S3 580 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 USP45Q70EL2 814 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 TMEFF1Q8IYR6 380 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 IFNL2Q8IZJ0 200 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 BCL6BQ8N143 479 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 FNIP1Q8TF40 1166 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 FBXO41Q8TF61 875 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 GFM2Q969S9 779 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 RUNDC1Q96C34 613 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms